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| Gene ID | At1g54490 |
| Gene name | XRN4 (EXORIBONUCLEASE 4) |
| Functional description | Involved in the ethylene response. XRN4 does not appear to regulate ethylene signaling via an RNA-INDUCED SILENCING COMPLEX-based RNA silencing mechanism but acts by independent means. Endogenous suppressor of posttranscriptional gene silencing. |
| HF | Ev | BS | Gene ID | Repr. ID | Gene Name | Functional Description | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|
| 0.11 | 5e-19 | 97 | At1g75660 | 843900 | XRN3 | Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products. | O.I. | C.G. | S.X. | |
| 0.08 | 1e-10 | 69 | At5g42540 | 834261 | XRN2 (EXORIBONUCLEASE 2) | Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN2 acts as a suppressor of posttranscriptional gene silencing. | O.I. | C.G. | S.X. | |
| 0.01 | 4e-1 | 38 | At5g51020 | 835175 | CRL (CRUMPLED LEAF) | Encodes CRL (CRUMPLED LEAF), a protein localized in the outer envelope membrane of plastids. Mutation in this gene affects the pattern of cell division, cell differentiation and plastid division. | O.I. | C.G. | S.X. | |
| 0.01 | 4e-1 | 38 | At5g02850 | 831762 | hydroxyproline-rich glycoprotein family protein | F:molecular_function unknown;P:biological_process unknown;C:unknown;MOFPB | O.I. | C.G. | S.X. | |
| 0.01 | 4e-1 | 38 | At5g06170 | 830504 | ATSUC9 (Sucrose-proton symporter 9) | sucrose symporter with hight affinity for sucrose (K0.5=0.066 +/- 0.025mM), that can also transport a wide range of glucosides. | O.I. | C.G. | S.X. | |
| 0.01 | 1e+0 | 36 | At5g64630 | 836584 | FAS2 (FASCIATA 2) | Chromatin Assembly Factor-1 (CAF-1) p60 subunit. Involved in organization of the shoot and root apical meristems. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. | O.I. | C.G. | S.X. | |
| 0.01 | 1e+0 | 36 | At5g38210 | 833803 | serine/threonine protein kinase family protein | F:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA | O.I. | C.G. | S.X. |
| HF | Ev | BS | Gene ID | Organism | Repr. ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.14 | 2e-16 | 89 | GmaAffx.38761.1.S1_at | Glycine max | AI794773 | - | - | 2e-17 | At1g54490 | XRN4 (EXORIBONUCLEASE 4) | O.I. | C.G. | S.X. | |
| 0.02 | 4e-2 | 40 | EBed02_SQ003_E04_at | Hordeum vulgare | EBed02_SQ003_E04 | - | - | 1e+0 | At1g70850 | MLP34 (MLP-LIKE PROTEIN 34) | O.I. | C.G. | S.X. | |
| 0.17 | 2e-25 | 119 | Os03g0794800 | Oryza sativa | AK058269.1 | - | XRN3 | 2e-25 | At1g54490 | XRN4 (EXORIBONUCLEASE 4) | O.I. | C.G. | S.X. | |
| 0.33 | 2e-37 | 159 | PtpAffx.210971.1.S1_at | Populus trichocarpa | pmrna21552 | hypothetical protein | - | 2e-37 | At1g54490 | XRN4 (EXORIBONUCLEASE 4) | O.I. | C.G. | S.X. | |
| 0.08 | 4e-7 | 57 | Ta.27926.2.S1_at | Triticum aestivum | BJ301489 | - | - | 2e-7 | At1g54490 | XRN4 (EXORIBONUCLEASE 4) | O.I. | C.G. | S.X. | |
| 0.01 | 2e+0 | 34 | 1611252_at | Vitis vinifera | CB982612 | - | - | 4e+0 | At1g62780 | unknown protein | O.I. | C.G. | S.X. | |
| 0.01 | 2e-1 | 38 | Zm.3694.1.A1_at | Zea mays | CF627007 | pollen ankyrin-like protein | - | 2e+0 | At1g19120 | small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative | O.I. | C.G. | S.X. |
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