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| Gene ID | At1g53500 |
| Gene name | MUM4 (MUCILAGE-MODIFIED 4) |
| Functional description | encodes a putative NDP-L-rhamnose synthase, an enzyme required for the synthesis of the pectin rhamnogalacturonan I, the major component of Arabidopsis mucilage. Gene is involved in seed coat mucilage cell development. Mutant analyses suggest that MUM4 is required for complete mucilage synthesis, cytoplasmic rearrangement and seed coat development. |
| HF | Ev | BS | Gene ID | Repr. ID | Gene Name | Functional Description | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|
| 0.80 | 0 | 866 | At3g14790 | 820707 | RHM3 (RHAMNOSE BIOSYNTHESIS 3) | F:UDP-L-rhamnose synthase activity, catalytic activity;P:UDP-rhamnose biosynthetic process, nucleotide-sugar metabolic process;C:soluble fraction;OBMPAFV | O.I. | C.G. | S.X. | |
| 0.73 | 0 | 658 | At1g78570 | 844193 | RHM1 (RHAMNOSE BIOSYNTHESIS 1) | Encodes a UDP-L-Rhamnose synthase involved in the biosynthesis of rhamnose, a major monosaccharide component of pectin. Catalyzes the conversion of UDP-D-Glc to UDP-L-Rha. The dehydrogenase domain of RHM1 was shown to catalyze the conversion of UDP-D-Glc to the reaction intermediate UDP-4-keto-6-deoxy-D-Glc using recombinant protein assay but the activity of the full-length protein was not determined as it could not be expressed in E. coli. | O.I. | C.G. | S.X. | |
| 0.24 | 2e-20 | 101 | At1g63000 | 842603 | NRS/ER (NUCLEOTIDE-RHAMNOSE SYNTHASE/EPIMERASE-REDUCTASE) | F:UDP-4-keto-rhamnose-4-keto-reductase activity, dTDP-4-dehydrorhamnose reductase activity, UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity, dTDP-4-dehydrorhamnose 3,5-epimerase activity;P:dTDP-rhamnose biosynthetic process, UDP-rhamnose biosynthetic process;C:soluble fraction, plasma membrane;BOPAFMV | O.I. | C.G. | S.X. | |
| 0.01 | 2e-2 | 42 | At5g60230 | 836145 | SEN2 (splicing endonuclease 2) | putative subunit of tRNA splicing endonuclease | O.I. | C.G. | S.X. | |
| 0.01 | 1e+0 | 36 | At5g65970 | 836727 | MLO10 (MILDEW RESISTANCE LOCUS O 10) | A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO10 belongs to the clade III, with AtMLO5, AtMLO7, AtMLO8, and AtMLO9. The gene is expressed in root and cotyledon vascular system, in root-shoot junction and lateral root primordia and in developing siliques, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s | O.I. | C.G. | S.X. | |
| 0.01 | 1e+0 | 36 | At5g22090 | 832270 | unknown protein | F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOPFBV | O.I. | C.G. | S.X. | |
| 0.01 | 1e+0 | 36 | At5g39250 | 833921 | F-box family protein | F:molecular_function unknown;P:unknown;C:unknown;PMO | O.I. | C.G. | S.X. | |
| 0.01 | 1e+0 | 36 | At4g16807 | 6241030 | unknown protein | F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFB | O.I. | C.G. | S.X. |
| HF | Ev | BS | Gene ID | Organism | Repr. ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.47 | 6e-43 | 176 | Gma.7572.1.S1_at | Glycine max | BI970498 | - | - | 5e-77 | At1g78570 | RHM1 (RHAMNOSE BIOSYNTHESIS 1) | O.I. | C.G. | S.X. | |
| 0.37 | 1e-50 | 200 | Contig4348_at | Hordeum vulgare | Contig4348 | - | - | 1e-84 | At1g78570 | RHM1 (RHAMNOSE BIOSYNTHESIS 1) | O.I. | C.G. | S.X. | |
| 0.37 | 3e-58 | 228 | Os03g0278200 | Oryza sativa | AK103544.1 | - | NAD-dependent epimerase/dehydratase family protein | 6e-83 | At1g78570 | RHM1 (RHAMNOSE BIOSYNTHESIS 1) | O.I. | C.G. | S.X. | |
| 0.43 | 6e-40 | 167 | PtpAffx.5688.1.S1_at | Populus trichocarpa | CV238865 | hypothetical protein | - | 9e-72 | At1g78570 | RHM1 (RHAMNOSE BIOSYNTHESIS 1) | O.I. | C.G. | S.X. | |
| 0.35 | 7e-48 | 192 | Ta.28218.1.S1_a_at | Triticum aestivum | CK157558 | - | - | 2e-58 | At1g78570 | RHM1 (RHAMNOSE BIOSYNTHESIS 1) | O.I. | C.G. | S.X. | |
| 0.42 | 7e-73 | 274 | 1614216_at | Vitis vinifera | CF512284 | hypothetical protein LOC100260586 | - | 2e-72 | At1g53500 | MUM4 (MUCILAGE-MODIFIED 4) | O.I. | C.G. | S.X. | |
| 0.32 | 1e-13 | 77 | Zm.13518.1.A1_at | Zea mays | CO522595 | hypothetical protein LOC100191391 | - | 3e-43 | At1g78570 | RHM1 (RHAMNOSE BIOSYNTHESIS 1) | O.I. | C.G. | S.X. |
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