CoP: Co-expressed Biological Processes

Homology analysis

Gene ID At1g51660

Gene name ATMKK4 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4)

Functional description Encodes a mitogen-activated map kinase kinase (there are nine in Arabidopsis) involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK5. In plants with both MKK5 and MKK6 levels reduced by RNAi plants, floral organs do not abscise suggestion a role for both proteins in mediating floral organ abscission.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	O.I.	C.G.	S.X.	Other DB
0.60	0	668	At3g21220	821676	ATMKK5 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5)	Encodes a mitogen-activated kinase kinase, dual specific protein kinase that is expressed in vegetative tissues and floral buds. Involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK4.In plants with both MKK5 and MKK6 levels reduced by RNAi plants, floral organs do not abscise suggestion a role for both proteins in mediating floral organ abscission.	O.I.	C.G.	S.X.
0.07	2e-3	44	At1g73500	843685	MKK9 (MAP KINASE KINASE 9)	member of MAP Kinase Kinase family. Autophosphorylates and also phosphorylates MPK3 and MPK6. Independently involved in ethylene and calmalexin biosynthesis. Induces transcription of ACS2, ACS6, ERF1, ERF2, ERF5, ERF6, CYP79B2, CYP79B3, CYP71A13 and PAD3.	O.I.	C.G.	S.X.
0.01	9e-3	42	At1g07990	837314	SIT4 phosphatase-associated family protein	F:unknown;P:biological_process unknown;C:endomembrane system;MFOPBV	O.I.	C.G.	S.X.
0.03	4e-2	40	At5g25760	832645	PEX4 (PEROXIN4)	mutant displays sucrose-dependent seedling development and reduced lateral root production. PEX4 interacts with PEX22 in a yeast two-hybrid. Necessary for peroxisome biogenesis. The PEX4 and PEX22 pair may be important during the remodeling of peroxisome matrix contents as glyoxysomes transition to leaf peroxisomes.	O.I.	C.G.	S.X.
0.01	4e-2	40	At3g07980	819989	MAPKKK6	MAP3K epsilon protein kinase 2 is functionally redundant with MAP3Ke1. Required for pollen development but not essential.	O.I.	C.G.	S.X.
0.02	1e-1	38	At5g47070	834753	protein kinase, putative	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	S.X.
0.01	1e-1	38	At5g66030	836733	ATGRIP	Involved in golgi protein trafficking. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner. Localized to the golgi apparatus, tyrosine 717 in AtGRIP is crucial for Golgi localization.	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.18	1e-11	71	Gma.11182.1.S1_a_at	Glycine max	BQ742221	-	-	8e-12	At1g51660	ATMKK4 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4)	O.I.	C.G.	S.X.
0.03	1e+0	34	Contig18167_at	Hordeum vulgare	Contig18167	-	-	2e-1	At5g35945	unknown protein	O.I.	C.G.	S.X.
0.02	1e+0	36	OsAffx.3069.1.S1_at	Oryza sativa	-	-	-	0			O.I.	C.G.	S.X.
0.30	7e-35	149	PtpAffx.11563.2.A1_a_at	Populus trichocarpa	CV256017	hypothetical protein	-	4e-35	At1g51660	ATMKK4 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4)	O.I.	C.G.	S.X.
0.02	4e-2	40	Ta.26793.1.A1_at	Triticum aestivum	CD491202	-	-	3e-45	At3g22750	protein kinase, putative	O.I.	C.G.	S.X.
0.07	1e-11	69	1606638_at	Vitis vinifera	CF518649	hypothetical protein LOC100258699	-	3e-11	At1g51660	ATMKK4 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4)	O.I.	C.G.	S.X.
0.01	2e-1	36	Zm.6048.1.S1_at	Zea mays	BE640401	serine/threonine protein kinase	-	7e-17	At2g24360	serine/threonine/tyrosine kinase, putative	O.I.	C.G.	S.X.

Back to the CoP portal site

Back to the KAGIANA project homepage