CoP: Co-expressed Biological Processes

Homology analysis

Gene ID At1g48000

Gene name MYB112 (myb domain protein 112)

Functional description Encodes a putative transcription factor (MYB112).

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	O.I.	C.G.	S.X.	Other DB
0.38	6e-49	194	At5g49620	835024	AtMYB78 (myb domain protein 78)	Member of the R2R3 factor gene family.	O.I.	C.G.	S.X.
0.17	2e-30	133	At2g47190	819332	MYB2 (MYB DOMAIN PROTEIN 2)	Encodes a MYB transcription factor that possesses an R2R3 MYB DNA binding domain and is known to regulate the expression of salt- and dehydration-responsive genes. Has been shown to bind calmodulin.	O.I.	C.G.	S.X.
0.22	5e-25	115	At3g06490	819827	MYB108 (myb domain protein 108)	putative transcription factor MYB108 (MYB108) mRNA,	O.I.	C.G.	S.X.
0.05	7e-12	71	At4g38620	830018	MYB4	Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2.	O.I.	C.G.	S.X.
0.09	1e-10	67	At5g40350	834033	MYB24 (myb domain protein 24)	Myb24 transcription factor. Member of the R2R3 factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development.	O.I.	C.G.	S.X.
0.13	4e-10	65	At1g68320	843161	MYB62 (myb domain protein 62)	putative transcription factor: R2R3-MYB transcription family	O.I.	C.G.	S.X.
0.05	2e-9	63	At4g09460	826530	ATMYB6	Encodes myb6 DNA-binding protein.	O.I.	C.G.	S.X.
0.04	6e-9	61	At1g63910	842694	AtMYB103 (myb domain protein 103)	member of MYB3R- and R2R3- type MYB- encoding genes	O.I.	C.G.	S.X.
0.04	2e-8	59	At3g11440	820317	MYB65 (MYB DOMAIN PROTEIN 65)	Member of the R2R3-MYB gene family. Similar to GA-induced Barley myb gene. May be induced during germination in response to GA. Double mutants with MYB33 are male sterile, showing defects in pollen development and anther development. Contains a binding site for miRNA159 and may be spatially regulated by this micro RNA. The male sterile phenotype of the MYB33/MYB65 double mutant is light and temperature sensitive. Fertility can be restored with increased light intensity and lower temperatures.	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.25	1e-17	91	GmaAffx.72329.1.S1_at	Glycine max	BF325282	MYB transcription factor MYB72	-	4e-18	At1g48000	MYB112 (myb domain protein 112)	O.I.	C.G.	S.X.
0.03	3e+0	32	Contig24654_at	Hordeum vulgare	Contig24654	-	-	1e-1	At1g28460	AGL59 (AGAMOUS-LIKE 59)	O.I.	C.G.	S.X.
0.10	8e-10	65	Os05g0132700	Oryza sativa	9633.m00347	-	Typical P-type R2R3 Myb protein (Fragment)	5e-10	At2g47190	MYB2 (MYB DOMAIN PROTEIN 2)	O.I.	C.G.	S.X.
0.21	9e-12	71	PtpAffx.208944.1.S1_at	Populus trichocarpa	pmrna17720	hypothetical protein	-	8e-29	At1g68320	MYB62 (myb domain protein 62)	O.I.	C.G.	S.X.
0.03	2e+0	34	TaAffx.31773.1.S1_at	Triticum aestivum	CA607934	-	-	4e-2	At5g23760	heavy-metal-associated domain-containing protein	O.I.	C.G.	S.X.
0.11	1e-1	36	1619579_at	Vitis vinifera	AB073014.1	-	-	4e-13	At1g22640	MYB3 (MYB DOMAIN PROTEIN 3)	O.I.	C.G.	S.X.
0.04	2e+0	32	ZmAffx.1044.1.A1_at	Zea mays	AI881789	-	-	3e-1	At5g66800	unknown protein	O.I.	C.G.	S.X.

Back to the CoP portal site

Back to the KAGIANA project homepage