Homology analysis

Gene ID At1g32230
Functional description Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.427e-97355At2g35510818116SRO1 (SIMILAR TO RCD ONE 1)Encodes a WWE domain-containing protein with 76% similarity to RCD1. The protein also contains a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.O.I.C.G.S.X.
0.016e-240At1g69480843280EXS family protein / ERD1/XPR1/SYG1 family proteinF:molecular_function unknown;P:biological_process unknown;C:integral to membrane, plasma membrane;FMPOBO.I.C.G.S.X.
0.012e-138At5g48770834935disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAO.I.C.G.S.X.
0.012e-138At4g05190825867ATK5 (ARABIDOPSIS THALIANA KINESIN 5)ATK5 encodes a kinesin protein involved in microtubule spindle morphogenesis. It acts as a minus-end directed motor as well as a plus-end tracking protein (+TIP). Localizes to mitotic spindle midzones and regions rich in growing plus-ends within phragmoplasts.O.I.C.G.S.X.
0.029e-136At5g57060835810unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.S.X.
0.029e-136At3g24770822075CLE41 (CLAVATA3/ESR-RELATED 41)Belongs to a large gene family, called CLE for CLAVATA3/ESR-related, encoding small peptides with conserved carboxyl termini. The C-terminal 12 amino acid sequence of CLE41 is identical to that of a dodeca peptide (TDIF, tracheary element differentiation inhibitory factor) isolated from Arabidopsis and functions as a suppressor of plant stem cell differentiation. TDIF sequence is also identical to the C-terminal 12 amino acids of CLE44 (At4g13195).O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.028e-240GmaAffx.84535.1.S1_s_atGlycine maxBE609257--3e-7At5g25940early nodulin-relatedO.I.C.G.S.X.
0.012e+034Contig19564_atHordeum vulgareContig19564--2e+0At5g60230SEN2 (splicing endonuclease 2)O.I.C.G.S.X.
0.027e+034Os08g0387000Oryza sativa9636.m02956--3e+0At3g13240unknown proteinO.I.C.G.S.X.
0.075e-344Ptp.1491.1.S1_s_atPopulus trichocarpaCK093025--6e-8At2g35510SRO1 (SIMILAR TO RCD ONE 1)O.I.C.G.S.X.
0.014e+034TaAffx.116515.1.S1_atTriticum aestivumAL826306--4e+0At2g24670-O.I.C.G.S.X.
0.057e-8571611994_a_atVitis viniferaCF214487hypothetical protein LOC100260925-7e-8At1g32230RCD1 (RADICAL-INDUCED CELL DEATH1)O.I.C.G.S.X.
0.016e+032ZmAffx.939.1.A1_atZea maysAI820322--9e-16At5g15400U-box domain-containing proteinO.I.C.G.S.X.

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