Homology analysis

Gene ID At1g29340
Gene name PUB17 (PLANT U-BOX 17)
Functional description Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity. It is required for cell death and full resistance specified by Arabidopsis RPM1 and RPS4 resistance proteins against Pseudomonas syringae pv tomato.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.027e-550At3g20430821588unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBO.I.C.G.S.X.
0.017e-550At1g23030838911armadillo/beta-catenin repeat family protein / U-box domain-containing proteinF:ubiquitin-protein ligase activity, binding;P:response to chitin;C:ubiquitin ligase complex;PMOFBVO.I.C.G.S.X.
0.023e-448At1g72310843563ATL3Encodes a putative RING-H2 zinc finger protein ATL3 (ATL3).O.I.C.G.S.X.
0.031e-346At2g28830817432binding / structural constituent of ribosome / ubiquitin-protein ligaseF:ubiquitin-protein ligase activity, structural constituent of ribosome, binding;P:response to chitin;C:ubiquitin ligase complex, ribosome, intracellular;PMFOBVO.I.C.G.S.X.
0.022e-242At4g13160826930unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMPFBVAO.I.C.G.S.X.
0.022e-242At3g52450824410PUB22 (PLANT U-BOX 22)Encodes a cytoplasmically localized U-box domain E3 ubiquitin ligase protein that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.O.I.C.G.S.X.
0.022e-242At1g31040839990unknown proteinF:unknown;P:biological_process unknown;C:unknown;PO.I.C.G.S.X.
0.017e-240Atcg00190--Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution.O.I.C.G.S.X.
0.017e-240At3g19320821466leucine-rich repeat family proteinF:protein binding;P:unknown;C:endomembrane system;PMOBFVAO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.022e-346Gma.4563.2.S1_atGlycine maxBE805396--9e-8At4g16430basic helix-loop-helix (bHLH) family proteinO.I.C.G.S.X.
0.041e-448Contig11953_atHordeum vulgareContig11953--5e-8At2g23140binding / ubiquitin-protein ligaseO.I.C.G.S.X.
0.029e-344Os09g0496000Oryza sativa9637.m02815--2e-1At3g06000leucine-rich repeat family proteinO.I.C.G.S.X.
0.181e-1689PtpAffx.203813.1.S1_atPopulus trichocarpapmrna7535hypothetical protein-8e-17At1g29340PUB17 (PLANT U-BOX 17)O.I.C.G.S.X.
0.023e-138TaAffx.51074.1.S1_atTriticum aestivumCA731412--9e-2At2g28830binding / structural constituent of ribosome / ubiquitin-protein ligaseO.I.C.G.S.X.
0.035e-3421607328_atVitis viniferaCF515496hypothetical protein LOC100253280-1e-2At1g29340PUB17 (PLANT U-BOX 17)O.I.C.G.S.X.
0.023e-240Zm.4163.1.A1_atZea maysAA979865--1e-10At2g23140binding / ubiquitin-protein ligaseO.I.C.G.S.X.



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