Homology analysis

Gene ID At1g25540
Gene name PFT1 (PHYTOCHROME AND FLOWERING TIME 1)
Functional description Encodes a nuclear protein that acts in a phyB pathway (but downstream of phyB) and induces flowering in response to suboptimal light conditions. Mutants are hypo-responsive to far-red and hyper-responsive to red light and flower late under long day conditions.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.015e-344At4g22470828342protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;MBOPFVAO.I.C.G.S.X.
0.018e-240At1g22300838837GRF10 (GENERAL REGULATORY FACTOR 10)Encodes a 14-3-3 protein. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1O.I.C.G.S.X.
0.013e-138At3g26120822211TEL1 (TERMINAL EAR1-LIKE 1)Similar to terminal ear1 in Zea mays. A member of mei2-like gene family; phylogenetic analysis revealed that TEL1 belongs to the third clade of mei2-like proteins (TEL clade), with conserved two N-terminal RNA recognition motifs (RRM), in addition to the C-terminal RRM, shared among all mei2-like proteins.O.I.C.G.S.X.
0.011e+036At5g61660836288glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVAO.I.C.G.S.X.
0.011e+036At3g13880820601pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:unknown;POMFBO.I.C.G.S.X.
0.011e+036At1g11710837715pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFBAO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.222e-34149GmaAffx.85901.1.S1_atGlycine maxBF069141--3e-35At1g25540PFT1 (PHYTOCHROME AND FLOWERING TIME 1)O.I.C.G.S.X.
0.131e-1481Contig13671_atHordeum vulgareContig13671--1e-14At1g25540PFT1 (PHYTOCHROME AND FLOWERING TIME 1)O.I.C.G.S.X.
0.013e+036OsAffx.9687.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.212e-77291PtpAffx.208968.1.S1_s_atPopulus trichocarpapmrna17776hypothetical protein-1e-77At1g25540PFT1 (PHYTOCHROME AND FLOWERING TIME 1)O.I.C.G.S.X.
0.052e-861TaAffx.122320.1.S1_atTriticum aestivumBQ620251--2e-8At1g25540PFT1 (PHYTOCHROME AND FLOWERING TIME 1)O.I.C.G.S.X.
0.014e-1361614966_atVitis viniferaBQ796346similar to pumilio domain-containing protein PPD1-1e-9At2g29190APUM2 (Arabidopsis Pumilio 2)O.I.C.G.S.X.
0.032e-654Zm.4762.1.A1_atZea maysBG874087--2e-6At1g25540PFT1 (PHYTOCHROME AND FLOWERING TIME 1)O.I.C.G.S.X.



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