Homology analysis

Gene ID At1g23820
Gene name SPDS1 (spermidine synthase 1)
Functional description Spermidine synthase.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.680771At1g70310843367SPDS2 (spermidine synthase 2)Spermidine synthase.O.I.C.G.S.X.
0.122e-1067At5g53120835392SPDS3 (SPERMIDINE SYNTHASE 3)encodes a novel spermine synthase and is a paralog of previously characterized spermidine synthases, SPDS1 and SPDS2. SPDS3 forms heterodimers with SDPS2, which in turn forms heterodimers with SDPS1 in vivo. The gene does not complement speDelta3 deficiency of spermidine synthase in yeast but DOES complement speDelta4 deficiency.O.I.C.G.S.X.
0.011e-138At4g38440830001-F:unknown;P:unknown;C:chloroplast;MFPOBO.I.C.G.S.X.
0.021e-138At3g55960824762NLI interacting factor (NIF) family proteinF:phosphatase activity;P:biological_process unknown;C:unknown;MOFPO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.462e-57224Gma.2891.1.S1_atGlycine maxBI971321--3e-49At1g23820SPDS1 (spermidine synthase 1)O.I.C.G.S.X.
0.121e-1583Contig1210_atHordeum vulgareContig1210--2e-16At5g53120SPDS3 (SPERMIDINE SYNTHASE 3)O.I.C.G.S.X.
0.195e-654Os07g0408700Oryza sativaAK099606.1-Spermidine synthase 2 (EC 2.5.1.16) (Putrescineaminopropyltransferase 2) (SPDSY 2)2e-10At1g70310SPDS2 (spermidine synthase 2)O.I.C.G.S.X.
0.476e-54212Ptp.4460.1.S1_atPopulus trichocarpaCV253940hypothetical protein-2e-56At1g70310SPDS2 (spermidine synthase 2)O.I.C.G.S.X.
0.081e-138TaAffx.86092.1.S1_atTriticum aestivumCA616812--3e-10At5g53120SPDS3 (SPERMIDINE SYNTHASE 3)O.I.C.G.S.X.
0.478e-903291619220_atVitis viniferaCA816725hypothetical protein LOC100257112-3e-89At1g23820SPDS1 (spermidine synthase 1)O.I.C.G.S.X.
0.395e-1891Zm.16536.1.A1_a_atZea maysAY103592.1hypothetical protein LOC100272866 /// spermidine synthase 1-1e-17At1g23820SPDS1 (spermidine synthase 1)O.I.C.G.S.X.



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