Homology analysis

Gene ID At1g23550
Gene name SRO2 (SIMILAR TO RCD ONE 2)
Functional description Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.189e-1891At1g70440843380SRO3 (SIMILAR TO RCD ONE 3)Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.O.I.C.G.S.X.
0.032e-654At5g62520836372SRO5 (SIMILAR TO RCD ONE 5)Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.O.I.C.G.S.X.
0.045e-446At3g47720823926SRO4 (SIMILAR TO RCD ONE 4)Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.O.I.C.G.S.X.
0.021e-138At5g45980834638WOX8 (WUSCHEL RELATED HOMEOBOX 8)Arabidopsis thaliana WOX8 protein. Contains similarity to homeodomain transcription factor. Positively regulates early embryonic growth.O.I.C.G.S.X.
0.031e-138At3g14670820695unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPVAO.I.C.G.S.X.
0.031e-138At3g12370820415ribosomal protein L10 family proteinF:structural constituent of ribosome;P:translation, ribosome biogenesis;C:ribosome, intracellular;BOPO.I.C.G.S.X.
0.015e-136At5g67530836889peptidyl-prolyl cis-trans isomerase cyclophilin-type family proteinF:ubiquitin-protein ligase activity, peptidyl-prolyl cis-trans isomerase activity;P:protein folding, protein ubiquitination;C:ubiquitin ligase complex;OBMFPAO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.033e+034HgAffx.23445.1.S1_atGlycine maxBF014404--1e+0At4g10680transcription factor IIB (TFIIB) family proteinO.I.C.G.S.X.
0.024e+032Contig14425_atHordeum vulgareContig14425--2e+0At5g45710RHA1 (ROOT HANDEDNESS 1)O.I.C.G.S.X.
0.034e+034OsAffx.5829.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.073e-344PtpAffx.210568.1.S1_atPopulus trichocarpapmrna20731hypothetical protein-3e-17At3g47720SRO4 (SIMILAR TO RCD ONE 4)O.I.C.G.S.X.
0.035e-136TaAffx.31446.1.S1_atTriticum aestivumCA616225--1e-1At2g23430ICK1O.I.C.G.S.X.
0.022e+0321616054_atVitis viniferaCF515616--9e-1At1g29962AGL64 (AGAMOUS-LIKE 64)O.I.C.G.S.X.
0.033e+032ZmAffx.929.1.S1_atZea maysAI795460--5e-2At5g17900-O.I.C.G.S.X.



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