Homology analysis

Gene ID At1g20440
Gene name COR47 (COLD-REGULATED 47)
Functional description Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. Cold regulated gene, amino acid sequence homology with Group II LEA (late embryogenesis abundant) proteins. Also responds to osmotic stress, ABA, dehydration and inhibits e.coli growth while overexpressed. COR47 and RAB18 double overexpressor plants are cold tolerant.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.414e-32139At1g20450838633ERD10 (EARLY RESPONSIVE TO DEHYDRATION 10)Encodes a gene induced by low temperature and dehydration. Inhibits e.coli growth while overexpressed. Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. LTI29 and LTI30 double overexpressors confer cold tolerance. Localized to membranes and cytoplasm.O.I.C.G.S.X.
0.294e-1065At1g76180843950ERD14 (EARLY RESPONSE TO DEHYDRATION 14)Encodes a dehydrin protein whose expression is induced early on in response to dehydration stress. This gene's expression to cold occurs in two waves, with early induction occurring within 1 h and secondary induction occurring 5 h after the beginning of cold stress. Expression is also induced in response to ABA but not in response to 2,4-D, BA, and GA3. ERD14 protein is capable of binding Ca2+, especially when the protein is phosphorylated.O.I.C.G.S.X.
0.053e-550At4g38410829998dehydrin, putativeF:molecular_function unknown;P:response to water, response to stress;C:cellular_component unknown;POMFBAO.I.C.G.S.X.
0.056e-342At5g66400836772RAB18 (RESPONSIVE TO ABA 18)Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. ABA- and drought-induced glycine-rice dehydrin protein. The ABA-induced expression of RAB18 was reduced following ACC application, indicating that ethylene inhibits the ABA signaling pathway. RAB18 is also expressed in response to the formation of the phospholipid diacylglycerol pyrophosphate. COR47 and RAB18 double overexpressor plants are cold tolerant. Expressed in guard cells.O.I.C.G.S.X.
0.046e-342At3g50980824262XERO1 (DEHYDRIN XERO 1)F:molecular_function unknown;P:response to water, response to stress;C:cellular_component unknown;PMO.I.C.G.S.X.
0.023e-240At4g02940828132oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity;P:biological_process unknown;C:unknown;POMFBO.I.C.G.S.X.
0.073e-240At2g21490816688LEA (DEHYDRIN LEA)F:molecular_function unknown;P:response to water, response to stress;C:cellular_component unknown;PMFOBVO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.091e-757Gma.10850.2.S1_atGlycine maxCF920623--2e-7At1g20440COR47 (COLD-REGULATED 47)O.I.C.G.S.X.
0.095e-548Contig1725_s_atHordeum vulgareContig1725--8e-5At1g20440COR47 (COLD-REGULATED 47)O.I.C.G.S.X.
0.052e-448Os11g0453900Oryza sativaAK109096.1-Dehydrin RAB 16D3e-2At2g21490LEA (DEHYDRIN LEA)O.I.C.G.S.X.
0.066e-446Ptp.3246.1.S1_x_atPopulus trichocarpaBU810335hypothetical protein-6e-4At1g20440COR47 (COLD-REGULATED 47)O.I.C.G.S.X.
0.081e-448Ta.2704.1.S1_x_atTriticum aestivumX59133.1rab protein-1e-4At3g50980XERO1 (DEHYDRIN XERO 1)O.I.C.G.S.X.
0.093e-5481622639_atVitis viniferaCA810871hypothetical protein LOC100254126-1e-4At1g20440COR47 (COLD-REGULATED 47)O.I.C.G.S.X.
0.044e-238Zm.14392.1.S1_atZea maysAY104757.1dehydrin1-6e-7At3g50980XERO1 (DEHYDRIN XERO 1)O.I.C.G.S.X.



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