Homology analysis

Gene ID At1g20220
Gene name nucleic acid binding
Functional description F:nucleic acid binding;P:biological_process unknown;C:plant-type cell wall;MBOPFVA

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.494e-91335At1g76010843932nucleic acid bindingF:nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MBOPFVAO.I.C.G.S.X.
0.042e-654At5g33390833329glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;BMOPFVAO.I.C.G.S.X.
0.038e-342At5g38110833791ASF1B (ANTI- SILENCING FUNCTION 1B)This gene is predicted to encode a silencing group A protein. Plant lines expressing RNAi constructs directed against SGA1 have reduced levels of agrobacterium-mediated root transformation.O.I.C.G.S.X.
0.041e-138At5g37720833750RNA and export factor-binding protein, putativeF:nucleotide binding, nucleic acid binding;P:biological_process unknown;C:nucleolus;MFPOBVO.I.C.G.S.X.
0.031e-138At3g55790824745unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;MPBOFVO.I.C.G.S.X.
0.015e-136At5g50420835110unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOO.I.C.G.S.X.
0.035e-136At4g39260830082GR-RBP8Encodes a glycine-rich protein with RNA binding domain at the N-terminus. Protein is structurally similar to proteins induced by stress in other plants. Gene expression is induced by cold. Transcript undergoes circadian oscillations that is depressed by overexpression of AtGRP7. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.051e-242Gma.10981.1.S1_atGlycine maxBM092081--1e-2At5g33390glycine-rich proteinO.I.C.G.S.X.
0.084e-961Contig7049_s_atHordeum vulgareContig7049--4e-8At1g76010nucleic acid bindingO.I.C.G.S.X.
0.096e-550Os03g0695600Oryza sativaAB026566.1-Proteasome subunit beta type 2 (EC 3.4.25.1) (20Sproteasome alpha subunit D) (20S proteasome subunitbeta-4)3e-3At3g22630PBD1 (20S PROTEASOME BETA SUBUNIT D1)O.I.C.G.S.X.
0.133e-1583PtpAffx.201790.1.S1_atPopulus trichocarpapmrna3567hypothetical protein-4e-16At1g76010nucleic acid bindingO.I.C.G.S.X.
0.094e-1169Ta.3487.1.S1_a_atTriticum aestivumAL825994--5e-11At1g20220nucleic acid bindingO.I.C.G.S.X.
0.136e-4441620195_atVitis viniferaCB347615hypothetical protein LOC100254082-4e-33At1g76010nucleic acid bindingO.I.C.G.S.X.
0.035e-238Zm.4357.3.S1_atZea maysAY104397.1hypothetical protein LOC100191858 /// splicing factor U2af 38 kDa subunit-3e-22At1g27650ATU2AF35AO.I.C.G.S.X.



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