Homology analysis

Gene ID At1g19610
Gene name PDF1.4
Functional description Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.021e-136At4g34860829638beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeF:catalytic activity, beta-fructofuranosidase activity;P:sucrose catabolic process, using beta-fructofuranosidase;C:cytosol;OPBO.I.C.G.S.X.
0.021e-136At3g16810820934APUM24 (Arabidopsis Pumilio 24)F:RNA binding, binding;P:unknown;C:nucleolus;MFPOBO.I.C.G.S.X.
0.021e-136At3g59030825072TT12 (TRANSPARENT TESTA 12)Encodes a proton antiporter. Involved in the transportation of proanthocyanidin precursors into the vacuole. In vitro transport experiments showed that cyanidin-3-O-glucoside (anthocyanin) was an effective substrate, whereas the proanthocyanidin precursor epicatechin was not transported. However catechin-3-O-glucoside inhibited anthocyanin transport in a dose-dependent manner suggesting that glycosylated epicatechin is the in vivo substrate. Recessive mutation has strong reduction of proanthocyanidin deposition in vacuoles and has reduced dormancy. Expressed in the endothelium of ovules and developing seeds.O.I.C.G.S.X.
0.024e-134At4g36270829784ATP bindingF:ATP binding;P:biological_process unknown;C:cellular_component unknown;MPOBO.I.C.G.S.X.
0.034e-134At1g06850837197AtbZIP52 (Arabidopsis thaliana basic leucine zipper 52)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMFOBVO.I.C.G.S.X.
0.034e-134At1g61740842471unknown proteinF:unknown;P:unknown;C:endomembrane system, integral to membrane;BOPAO.I.C.G.S.X.
0.024e-134At1g10890837632unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOBFPVAO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.052e+032HgAffx.3133.1.S1_atGlycine maxCK349557--3e+0At1g19610PDF1.4O.I.C.G.S.X.
0.063e+030HVSMEl0005O07f_atHordeum vulgareHVSMEl0005O07f--5e-1At5g02560HTA12O.I.C.G.S.X.
0.063e+032OsAffx.21031.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.142e-446PtpAffx.201643.1.S1_atPopulus trichocarpapmrna3260hypothetical protein-1e-4At1g19610PDF1.4O.I.C.G.S.X.
0.091e-136TaAffx.59833.1.S1_atTriticum aestivumCA594691--9e-2At1g19610PDF1.4O.I.C.G.S.X.
0.062e+0301619045_atVitis viniferaCB341512--2e+0At4g04900RIC10 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 10)O.I.C.G.S.X.
0.037e-132Zm.17856.2.A1_atZea maysBG265848hypothetical protein LOC100272418-2e-21At3g5954060S ribosomal protein L38 (RPL38B)O.I.C.G.S.X.



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