CoP: Co-expressed Biological Processes

Homology analysis

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	O.I.	C.G.	S.X.
0.27	5e-35	149	At3g50760	824240	GATL2 (Galacturonosyltransferase-like 2)	Encodes a protein with putative galacturonosyltransferase activity.	O.I.	C.G.	S.X.
0.17	1e-17	91	At1g13250	837885	GATL3 (Galacturonosyltransferase-like 3)	Encodes a protein with putative galacturonosyltransferase activity.	O.I.	C.G.	S.X.
0.16	4e-14	79	At3g28340	822462	GATL10 (Galacturonosyltransferase-like 10)	Encodes a protein with putative galacturonosyltransferase activity.	O.I.	C.G.	S.X.
0.09	4e-14	79	At1g24170	839030	LGT9	Encodes a protein with putative galacturonosyltransferase activity.	O.I.	C.G.	S.X.
0.06	2e-9	63	At1g70090	843345	LGT8 (GLUCOSYL TRANSFERASE FAMILY 8)	Encodes a protein with putative galacturonosyltransferase activity.	O.I.	C.G.	S.X.
0.07	9e-9	61	At3g06260	819800	GATL4 (Galacturonosyltransferase-like 4)	Encodes a protein with putative galacturonosyltransferase activity.	O.I.	C.G.	S.X.
0.07	2e-6	54	At3g62660	825440	GATL7 (Galacturonosyltransferase-like 7)	Encodes a protein with putative galacturonosyltransferase activity.	O.I.	C.G.	S.X.
0.03	8e-3	42	At3g11660	820338	NHL1	encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus. Localization of the gene product is similar to that of NHL3 (plasma membrane) but it is yet inconclusive.	O.I.	C.G.	S.X.

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.
0.23	1e-2	42	GmaAffx.64904.1.S1_at	Glycine max	BQ133883	-	-	4e-3	At1g19300	PARVUS (PARVUS)	O.I.	C.G.	S.X.
0.03	2e-2	40	Contig25984_at	Hordeum vulgare	Contig25984	-	-	9e-1	At4g24380	unknown protein	O.I.	C.G.	S.X.
0.07	7e-2	40	Os.50280.1.S1_at	Oryza sativa	-	-	-	0			O.I.	C.G.	S.X.
0.31	1e-24	115	PtpAffx.136323.1.S1_at	Populus trichocarpa	CF234332	glycosyltransferase family GT8	-	9e-25	At1g19300	PARVUS (PARVUS)	O.I.	C.G.	S.X.
0.05	6e-4	46	TaAffx.63432.1.S1_at	Triticum aestivum	BQ802347	-	-	4e-4	At1g19300	PARVUS (PARVUS)	O.I.	C.G.	S.X.
0.09	7e-16	83	1616007_at	Vitis vinifera	CB002013	hypothetical protein LOC100264254	-	3e-15	At1g19300	PARVUS (PARVUS)	O.I.	C.G.	S.X.
0.03	1e-2	40	Zm.1452.1.A1_at	Zea mays	CA403441	hypothetical protein LOC100191570	-	9e-3	At3g50760	GATL2 (Galacturonosyltransferase-like 2)	O.I.	C.G.	S.X.

Gene ID	At1g19300
Gene name	PARVUS (PARVUS)
Functional description	The PARVUS/GLZ1 gene encodes a putative family 8 glycosyl transferase that contributes to xylan biosynthesis. Its gene expression shows good co-variance with the IRX3 gene involved in secondary cell wall synthesis. PARVUS/GLZ1 is predicted to have galacturonosyltransferase activity and may be involved in the formation of the complex oligosaccharide sequence present at the reducing end of xylan. PARVUS is expressed in cells undergoing secondary wall thickening, and parvus mutants have thinner cell walls.