Homology analysis

Gene ID At1g16740
Gene name ribosomal protein L20 family protein
Functional description F:structural constituent of ribosome, RNA binding;P:translation, ribosome biogenesis;C:ribosome, intracellular;BOPM

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.022e-136At4g37190829873-F:unknown;P:protein polymerization;C:cytosol, plasma membrane;MFPOO.I.C.G.S.X.
0.027e-134At2g23150816847NRAMP3 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3)Encodes a member of the Nramp2 metal transporter family; like its homolog Atnramp4, localized in vacuolar membrane. Seedlings of double mutant, atnramp3-1 atnramp4-1, were arrested at early germination.O.I.C.G.S.X.
0.017e-134At1g22760838882PAB3 (POLY(A) BINDING PROTEIN 3)Putative poly(A) binding protein May there fore function in posttranscriptional regulation, including mRNA turnover and translational initiation. Expression detected only in floral organs.O.I.C.G.S.X.
0.023e+032At5g24160832482SQE6 (SQUALENE MONOXYGENASE 6)F:squalene monooxygenase activity, oxidoreductase activity, FAD binding;P:sterol biosynthetic process;C:endomembrane system, integral to membrane;OBFMPAO.I.C.G.S.X.
0.023e+032At5g24150832480SQP1squalene monooxygenase gene homologO.I.C.G.S.X.
0.013e+032At5g02340831744DC1 domain-containing proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:intracellular;PMFO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.233e-1065GmaAffx.44227.1.S1_atGlycine maxAW349889--4e-10At1g16740ribosomal protein L20 family proteinO.I.C.G.S.X.
0.443e-29127Contig11368_atHordeum vulgareContig11368--1e-28At1g16740ribosomal protein L20 family proteinO.I.C.G.S.X.
0.352e-859Os05g0528200Oryza sativaAK062985.1--2e-8At1g16740ribosomal protein L20 family proteinO.I.C.G.S.X.
0.436e-27121Ptp.7864.1.S1_atPopulus trichocarpaCX654512hypothetical protein-7e-27At1g16740ribosomal protein L20 family proteinO.I.C.G.S.X.
0.272e-1789TaAffx.12923.1.S1_atTriticum aestivumBQ169232--4e-17At1g16740ribosomal protein L20 family proteinO.I.C.G.S.X.
0.183e-19931614992_atVitis viniferaCF415269hypothetical protein LOC100263906-1e-18At1g16740ribosomal protein L20 family proteinO.I.C.G.S.X.
0.385e-650Zm.6662.1.A1_a_atZea maysAY108391.150S ribosomal protein L20-3e-5At1g16740ribosomal protein L20 family proteinO.I.C.G.S.X.



Back to the CoP portal site

Back to the KAGIANA project homepage