Homology analysis

Gene ID At1g15550
Functional description Involved in later steps of the gibberellic acid biosynthetic pathway. Activated by AGAMOUS in a cal-1, ap1-1 background. Deletion of 208 bp from -1016 to -809 (Δ-808) resulted in loss of GA-negative feedback (this sequence, which contains a 43-bp sequence GNFEI, was shown to be sufficient for GA-negative feedback).

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.424e-45182At1g80340844374GA3OX2 (GIBBERELLIN 3-OXIDASE 2)Encodes a protein with gibberellin 3 β-hydroxylase activity. The protein was heterologously expressed in E. coli and shown to catalyze the hydroxylation of both GA9 and GA20.O.I.C.G.S.X.
0.122e-25117At1g80330844373GA3OX4 (GIBBERELLIN 3-OXIDASE 4)Encodes a protein with gibberellin 3-oxidase activity. The enzyme, expressed and purified in E.coli, was shown to catalyze the 3β-hydroxylation of GA20 into GA29.O.I.C.G.S.X.
0.069e-342At4g21690828256GA3OX3 (GIBBERELLIN 3-OXIDASE 3)F:oxidoreductase activity, iron ion binding;P:unknown;C:cellular_component unknown;POBFMO.I.C.G.S.X.
0.021e-138At4g32770829413VTE1 (VITAMIN E DEFICIENT 1)Tocopherol cyclase involved in tocopherol (vitamin E)synthesis. VTE1 over-expressing plants have increased tocopherol indicating VTE1 is a major limiting factor in tocopherol synthesis. Mutants defective in this gene accumulate high amounts of zeaxanthin in conditions of high light or low temperature. Plays a role in the adaptation to low temperature stress, notably phloem loading.O.I.C.G.S.X.
0.012e+034At5g44070834430CAD1 (CADMIUM SENSITIVE 1)Phytochelatin synthase gene confers tolerance to cadmium ions. Catalyzes phytochelatin (PC) synthesis from glutathione (GSH) in the presence of Cd2+, Zn2+, Cu2+ and Fe3+, but not by Co2+ or Ni2+.O.I.C.G.S.X.
0.022e+034At5g63130836433octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.S.X.
0.012e+034At5g52800835357DNA primaseF:DNA primase activity;P:DNA replication;C:cellular_component unknown;MOPVO.I.C.G.S.X.
0.022e+034At5g58110835923ATPase activator/ chaperone bindingF:ATPase activator activity, chaperone binding;P:biological_process unknown;C:cytoplasm;MPOO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.051e-552GmaAffx.79193.1.S1_atGlycine maxBI471175--5e-6At1g15550GA3OX1 (GIBBERELLIN 3-OXIDASE 1)O.I.C.G.S.X.
0.021e+034HT07C05r_s_atHordeum vulgareHT07C05r--2e+0At1g54140TAFII21 (TATA BINDING PROTEIN ASSOCIATED FACTOR 21KDA SUBUNIT)O.I.C.G.S.X.
0.021e+036Os01g0260300Oryza sativa9629.m01542--1e-1At5g05230ubiquitin-protein ligaseO.I.C.G.S.X.
0.022e-138PtpAffx.158726.1.S1_atPopulus trichocarpaBU877899hypothetical protein-3e-14At1g67340zinc finger (MYND type) family protein / F-box family proteinO.I.C.G.S.X.
0.032e+034TaAffx.24590.1.S1_atTriticum aestivumCA716574--8e-1At1g15550GA3OX1 (GIBBERELLIN 3-OXIDASE 1)O.I.C.G.S.X.
0.026e-1341609261_s_atVitis viniferaCB982050hypothetical protein LOC100264228-4e+0At2g26020PDF1.2b (plant defensin 1.2b)O.I.C.G.S.X.
0.024e+032Zm.6085.3.S1_a_atZea maysAI668392--9e+0At5g53820unknown proteinO.I.C.G.S.X.

Back to the CoP portal site

Back to the KAGIANA project homepage