Homology analysis

Gene ID At1g11190
Gene name BFN1 (BIFUNCTIONAL NUCLEASE I)
Functional description Encodes a bifunctional nuclease that acts on both RNA and DNA involved in nucleic acid degradation to facilitate nucleotide and phosphate recovery during senescence. It has mismatch-specific endonuclease activity with wide recognition of single base mismatches as well as the ability to cleave indel types of mismatches (heteroduplexes with loops).

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.042e-344At4g21600828246ENDO5 (endonuclease 5)Encodes a protein with mismatch-specific endonuclease activity with a preference for T/G, A/G, and G/G of single base mismatches. It also has the ability to cleave indel types of mismatches (heteroduplexes with loops).O.I.C.G.S.X.
0.011e-138At5g48120834864bindingF:binding;P:unknown;C:cellular_component unknown;MFOPO.I.C.G.S.X.
0.031e-138At1g68290843158ENDO 2 (endonuclease 2)Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro.O.I.C.G.S.X.
0.021e-138At1g49200841343zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVO.I.C.G.S.X.
0.075e-136At4g21585828244ENDO4 (endonuclease 4)Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro.O.I.C.G.S.X.
0.012e+034At5g01220831888SQD2 (sulfoquinovosyldiacylglycerol 2)involved in sulfolipid biosynthesisO.I.C.G.S.X.
0.042e+034At4g21590828245ENDO3 (endonuclease 3)Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed in the floral meristem and during stamen development.O.I.C.G.S.X.
0.022e+034At4g23730828473aldose 1-epimerase family proteinF:isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity;P:galactose metabolic process, carbohydrate metabolic process;C:cellular_component unknown;BOPFMO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.032e-138Gma.9599.1.A1_atGlycine maxBU551270--5e-2At1g11190BFN1 (BIFUNCTIONAL NUCLEASE I)O.I.C.G.S.X.
0.163e-1065Contig8356_s_atHordeum vulgareContig8356--8e-10At1g11190BFN1 (BIFUNCTIONAL NUCLEASE I)O.I.C.G.S.X.
0.202e-1481Os04g0636400Oryza sativaAK061848.1-CEL I mismatch endonuclease1e-14At1g11190BFN1 (BIFUNCTIONAL NUCLEASE I)O.I.C.G.S.X.
0.319e-31135PtpAffx.209713.1.S1_atPopulus trichocarpapmrna19174hypothetical protein-7e-31At1g11190BFN1 (BIFUNCTIONAL NUCLEASE I)O.I.C.G.S.X.
0.175e-756Ta.26286.1.S1_a_atTriticum aestivumBJ250656--7e-7At1g11190BFN1 (BIFUNCTIONAL NUCLEASE I)O.I.C.G.S.X.
0.035e-1341610661_atVitis viniferaCD801217similar to cytokinin receptor 1-7e-1At1g11190BFN1 (BIFUNCTIONAL NUCLEASE I)O.I.C.G.S.X.
0.022e-136Zm.5892.1.A1_atZea maysBM267559propionyl-CoA carboxylase beta chain-3e-11At4g34030MCCB (3-METHYLCROTONYL-COA CARBOXYLASE)O.I.C.G.S.X.



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