Homology analysis

Gene ID At1g08070
Gene name pentatricopeptide (PPR) repeat-containing protein
Functional description F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFB

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.017e-550At5g55740835668CRR21 (chlororespiratory reduction 21)Encodes a member of the E+ subgroup of the PPR protein family, containing the E and E+ motifs following a tandem array of PPR motifs. It also contains an unknown motif consisting of 15 aa, which is highly conserved in some PPR proteins, including CRR4. CRR21 is involved in RNA editing of the site 2 of ndhD (ndhD-2),which encodes a subunit of the NDH complex. The RNA editing changes aa 128 from Ser to Leu. Mutants have impaired NDH complex activity.O.I.C.G.S.X.
0.013e-448At4g14850827142LOI1 (lovastatin insensitive 1)Encodes a pentatricopeptide (PPR) protein that binds single-stranded RNA. The N-terminal portion of the protein can localize to the mitochondria. Mutations in this gene make plants less sensitive to inhibitors of the MEP and MVA pathways of isoprenoid biosynthesis and increase the activity of HMG CoA reductase.O.I.C.G.S.X.
0.023e-448At3g22690821840pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:regulation of chlorophyll biosynthetic process, photosystem II assembly, photosystem I assembly, thylakoid membrane organization, RNA modification;C:chloroplast;POMFBAO.I.C.G.S.X.
0.023e-448At3g05240819688pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;POFMBO.I.C.G.S.X.
0.013e-448At2g01510814680pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFBO.I.C.G.S.X.
0.011e-346At4g18750827609DOT4 (DEFECTIVELY ORGANIZED TRIBUTARIES 4)Encodes a pentatricopeptide (PPR) protein involved in leaf and root development. dot4 mutants have an aberrant midgap venation pattern in juvenile leaves and cotyledons.O.I.C.G.S.X.
0.021e-346At3g16610820912pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFBO.I.C.G.S.X.
0.041e-346At3g08820820029pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFBO.I.C.G.S.X.
0.031e-346At1g20230838612pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;POMFBO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.024e-138GmaAffx.44155.1.S1_atGlycine maxAW757000--3e-3At1g31430pentatricopeptide (PPR) repeat-containing proteinO.I.C.G.S.X.
0.021e-138Contig23940_atHordeum vulgareContig23940--5e-1At4g16835pentatricopeptide (PPR) repeat-containing proteinO.I.C.G.S.X.
0.034e-552Os03g0807400Oryza sativaAK065345.1-Calreticulin/calnexin family protein5e-16At1g56340CRT1 (CALRETICULIN 1)O.I.C.G.S.X.
0.147e-963PtpAffx.214138.1.S1_atPopulus trichocarpapmrna27511hypothetical protein-5e-9At1g08070pentatricopeptide (PPR) repeat-containing proteinO.I.C.G.S.X.
0.022e-242TaAffx.114037.1.S1_atTriticum aestivumCA599780--7e-2At1g69160unknown proteinO.I.C.G.S.X.
0.023e-1361621545_atVitis viniferaCB977883hypothetical protein LOC100266544-6e-5At5g13270pentatricopeptide (PPR) repeat-containing proteinO.I.C.G.S.X.
0.021e-138Zm.15449.1.A1_atZea maysCA403172--3e-2At1g56690pentatricopeptide (PPR) repeat-containing proteinO.I.C.G.S.X.



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