Homology analysis

Gene ID At1g07320
Gene name RPL4
Functional description encodes a plastid ribosomal protein L4

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.012e-344At5g13390831180NEF1 (NO EXINE FORMATION 1)Required for normal pollen development and lipid accumulation within the tapetumO.I.C.G.S.X.
0.032e-344At5g19260832046unknown proteinF:unknown;P:unknown;C:unknown;MOFPBVO.I.C.G.S.X.
0.042e-344At3g51880824351HMGB1 (HIGH MOBILITY GROUP B 1)Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha. In interphase cells, HMGB1 is found throughout the nucleus, whereas in mitotic cells it is not chromatin-associated.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.064e-550Gma.16428.1.S1_atGlycine maxCD415062--3e-5At1g07320RPL4O.I.C.G.S.X.
0.033e+032Contig25645_atHordeum vulgareContig25645--7e-2At3g50550unknown proteinO.I.C.G.S.X.
0.035e-240OsAffx.21445.3.S1_x_atOryza sativa---0O.I.C.G.S.X.
0.155e-1789PtpAffx.17302.1.S1_atPopulus trichocarpaBP931015hypothetical protein-5e-17At1g07320RPL4O.I.C.G.S.X.
0.044e-136TaAffx.30499.1.S1_atTriticum aestivumCA624792--4e+0At5g14010zinc finger (C2H2 type) family proteinO.I.C.G.S.X.
0.035e-1341609341_s_atVitis viniferaCF202467.1hypothetical protein LOC100265359-2e-3At5g40630ubiquitin family proteinO.I.C.G.S.X.
0.033e+032ZmAffx.451.1.A1_atZea maysAI677139--8e-1At5g66740unknown proteinO.I.C.G.S.X.

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