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| Gene ID | At1g01060 |
| Gene name | LHY (LATE ELONGATED HYPOCOTYL) |
| Functional description | LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1 |
| HF | Ev | BS | Gene ID | Repr. ID | Gene Name | Functional Description | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|
| 0.08 | 5e-15 | 83 | At2g46830 | 819296 | CCA1 (CIRCADIAN CLOCK ASSOCIATED 1) | Encodes a transcriptional repressor that performs overlapping functions with LHY in a regulatory feedback loop that is closely associated with the circadian oscillator of Arabidopsis. Binds to the evening element in the promoter of TOC1 and represses TOC1 transcription. CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis. | O.I. | C.G. | S.X. | |
| 0.02 | 3e-4 | 48 | At1g75520 | 843888 | SRS5 (SHI-RELATED SEQUENCE 5) | A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. | O.I. | C.G. | S.X. | |
| 0.01 | 2e-2 | 42 | At4g35310 | 829685 | CPK5 (calmodulin-domain protein kinase 5) | calmodulin-domain protein kinase CDPK isoform 5 (CPK5) | O.I. | C.G. | S.X. | |
| 0.01 | 2e-1 | 38 | At5g54910 | 835582 | DEAD/DEAH box helicase, putative | F:helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity;P:biological_process unknown;C:nucleolus;BOMFPAV | O.I. | C.G. | S.X. | |
| 0.01 | 2e-1 | 38 | At5g49700 | 835033 | DNA-binding protein-related | F:unknown;P:biological_process unknown;C:unknown;PMBF | O.I. | C.G. | S.X. |
| HF | Ev | BS | Gene ID | Organism | Repr. ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.12 | 9e-8 | 59 | GmaAffx.42059.1.S1_at | Glycine max | BM892355 | MYB transcription factor MYB173 /// MYB transcription factor MYB174 | - | 9e-10 | At5g17300 | myb family transcription factor | O.I. | C.G. | S.X. | |
| 0.07 | 9e-21 | 101 | Contig3873_at | Hordeum vulgare | Contig3873 | - | - | 3e-20 | At1g01060 | LHY (LATE ELONGATED HYPOCOTYL) | O.I. | C.G. | S.X. | |
| 0.07 | 7e-31 | 137 | Os08g0157600 | Oryza sativa | AY452478.1 | - | Myb, DNA-binding domain containing protein | 5e-31 | At1g01060 | LHY (LATE ELONGATED HYPOCOTYL) | O.I. | C.G. | S.X. | |
| 0.11 | 1e-37 | 159 | PtpAffx.7997.1.S1_at | Populus trichocarpa | BU868664 | hypothetical protein | - | 2e-10 | At2g46830 | CCA1 (CIRCADIAN CLOCK ASSOCIATED 1) | O.I. | C.G. | S.X. | |
| 0.02 | 1e-6 | 56 | Ta.7524.1.A1_at | Triticum aestivum | BJ250276 | - | - | 6e-7 | At1g01060 | LHY (LATE ELONGATED HYPOCOTYL) | O.I. | C.G. | S.X. | |
| 0.13 | 4e-19 | 95 | 1607032_s_at | Vitis vinifera | CB345316 | hypothetical protein LOC100250535 | - | 2e-18 | At1g01060 | LHY (LATE ELONGATED HYPOCOTYL) | O.I. | C.G. | S.X. | |
| 0.06 | 3e-20 | 99 | Zm.7073.2.A1_at | Zea mays | AI600777 | - | - | 1e-2 | At5g37260 | RVE2 (REVEILLE 2) | O.I. | C.G. | S.X. |
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