Homology analysis

Gene ID 1622682_at
Gene name hypothetical protein LOC100256501
Functional description Similar to At1g16720: HCF173 (high chlorophyll fluorescence phenotype 173) (Ev=2e-67)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
1.00013781610021_atCB001944--2e-67At1g16720HCF173 (high chlorophyll fluorescence phenotype 173)O.I.C.G.S.X.
0.024e-1341621401_atCF210089hypothetical protein LOC100245378-2e-18At5g17640unknown proteinO.I.C.G.S.X.
0.034e-1341612685_a_atCD798867hypothetical protein LOC100242160-1e+0At4g16610zinc finger (C2H2 type) family proteinO.I.C.G.S.X.
0.024e-1341610823_atCB339209hypothetical protein LOC100255274-7e-6At3g04760pentatricopeptide (PPR) repeat-containing proteinO.I.C.G.S.X.
0.024e-1341608797_atCF210089--2e-18At5g17640unknown proteinO.I.C.G.S.X.
0.032e+0321622734_atCF214685hypothetical protein LOC100248095-4e-9At1g52760esterase/lipase/thioesterase family proteinO.I.C.G.S.X.
0.022e+0321622564_atBM437316hypothetical protein LOC100260573-1e-35At1g5868440S ribosomal protein S2, putativeO.I.C.G.S.X.
0.022e+0321621262_atCD008912--6e-3At1g67210proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family proteinO.I.C.G.S.X.
0.022e+0321620537_atBM437394hypothetical protein LOC100266362-5e-20At1g24560unknown proteinO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.422e-67256At1g16720Arabidopsis thaliana838243HCF173 (high chlorophyll fluorescence phenotype 173)Encodes HCF173, a protein with weak similarities to the superfamily of the short-chain dehydrogenases/reductases. HCF173 is involved in the initiation of translation of the psbA mRNA. Mutants shows a high chlorophyll fluorescence phenotype (hcf) and are severely affected in the accumulation of PSII subunits. The protein HCF173 is localized in the chloroplast, where it is mainly associated with the membrane system and is part of a higher molecular weight complex with psbA mRNA as a component of this complex.---O.I.C.G.S.X.
0.321e-47190Gma.8776.1.S1_atGlycine maxBI968212--4e-47At1g16720HCF173 (high chlorophyll fluorescence phenotype 173)O.I.C.G.S.X.
0.264e-33141Contig5772_atHordeum vulgareContig5772--4e-52At1g16720HCF173 (high chlorophyll fluorescence phenotype 173)O.I.C.G.S.X.
0.213e-40167Os06g0704700Oryza sativaAK120907.1-Conserved hypothetical protein1e-34At1g16720HCF173 (high chlorophyll fluorescence phenotype 173)O.I.C.G.S.X.
0.482e-111402PtpAffx.12745.1.A1_atPopulus trichocarpaCV235156hypothetical protein-5e-78At1g16720HCF173 (high chlorophyll fluorescence phenotype 173)O.I.C.G.S.X.
0.262e-24113Ta.23339.1.S1_atTriticum aestivumCA746363--3e-43At1g16720HCF173 (high chlorophyll fluorescence phenotype 173)O.I.C.G.S.X.
0.274e-36151Zm.3483.1.A1_atZea maysBG842836--3e-30At1g16720HCF173 (high chlorophyll fluorescence phenotype 173)O.I.C.G.S.X.



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