Homology analysis

Gene ID 1617399_at
Gene name hypothetical protein LOC100262132
Functional description Similar to At5g17790: VAR3 (VARIEGATED 3) (Ev=5e-21)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.023e-1341619495_atCA818305--1e-4At1g44920unknown proteinO.I.C.G.S.X.
0.023e-1341615706_atCA816068hypothetical protein LOC100257450-1e-4At1g44920unknown proteinO.I.C.G.S.X.
0.031e+0321621092_atCF210623hypothetical protein LOC100256288-5e+0Atcg01080-O.I.C.G.S.X.
0.041e+0321621194_atCF405928--1e-6At5g04130DNA topoisomerase, ATP-hydrolyzing, putative / DNA topoisomerase II, putative / DNA gyrase, putativeO.I.C.G.S.X.
0.021e+0321621098_atCB975046hypothetical protein LOC100245221-8e-13At1g16900sugar binding / transferase, transferring glycosyl groupsO.I.C.G.S.X.
0.031e+0321617253_atCD007084--6e-3At2g15270unknown proteinO.I.C.G.S.X.
0.031e+0321613424_atCF516066hypothetical protein LOC100267845-6e-3At2g15270unknown proteinO.I.C.G.S.X.
0.025e+0301620254_atCD713450--2e+0At5g12990CLE40 (CLAVATA3/ESR-RELATED 40)O.I.C.G.S.X.
0.035e+0301618092_atCF203576.1--4e+0At2g05380GRP3S (GLYCINE-RICH PROTEIN 3 SHORT ISOFORM)O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.105e-21101At5g17790Arabidopsis thaliana831647VAR3 (VARIEGATED 3)Encodes a 85.9 kDa protein containing novel repeats and zinc fingers described as protein interaction domains. VAR3 is a part of a protein complex required for normal chloroplast and palisade cell development. Mutants display a variegated phenotype due to somatic areas lacking or containing developmentally retarded chloroplasts and greatly reduced numbers of palisade cells.---O.I.C.G.S.X.
0.258e-33141GmaAffx.69683.1.S1_atGlycine maxCA799656--7e-9At5g17790VAR3 (VARIEGATED 3)O.I.C.G.S.X.
0.038e+030Contig4157_s_atHordeum vulgareContig4157--1e-25At1g60780HAP13 (HAPLESS 13)O.I.C.G.S.X.
0.045e-136OsAffx.8646.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.263e-51202Ptp.1746.1.A1_atPopulus trichocarpaCV236183hypothetical protein-2e+0At5g17790VAR3 (VARIEGATED 3)O.I.C.G.S.X.
0.034e+032TaAffx.66759.1.A1_atTriticum aestivumBG904379--3e+0At4g18692unknown proteinO.I.C.G.S.X.
0.042e+032Zm.13332.1.S1_atZea maysAY105769.1ribosomal protein L32 containing protein-2e-2At1g69485structural constituent of ribosomeO.I.C.G.S.X.



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