Homology analysis

Gene ID 1617373_s_at
Gene name hypothetical protein LOC100245878
Functional description Similar to At5g23570: SGS3 (SUPPRESSOR OF GENE SILENCING 3) (Ev=5e-6)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.9109751607841_atCA816697hypothetical protein LOC100245878-5e-6At5g23570SGS3 (SUPPRESSOR OF GENE SILENCING 3)O.I.C.G.S.X.
0.032e-2381622289_atCD720924--1e+0At5g15390tRNA/rRNA methyltransferase (SpoU) family proteinO.I.C.G.S.X.
0.032e-2381618501_atCD720924--1e+0At5g15390tRNA/rRNA methyltransferase (SpoU) family proteinO.I.C.G.S.X.
0.033e-1341614115_atCF207341hypothetical protein LOC100259785-1e+0At4g25790allergen V5/Tpx-1-related family proteinO.I.C.G.S.X.
0.031e+0321618227_atCB981519hypothetical protein LOC100256050-4e-20At1g73570suppressor of lin-12-like protein-related / sel-1 protein-relatedO.I.C.G.S.X.
0.021e+0321614535_atCF211631hypothetical protein LOC100266825-1e-35At3g60190ADL1E (ARABIDOPSIS DYNAMIN-LIKE 1E)O.I.C.G.S.X.
0.021e+0321608126_atBQ796659hypothetical protein LOC100253973-2e+0At5g01470unknown proteinO.I.C.G.S.X.
0.025e+0301622658_atCD713457--5e+0At4g03565-O.I.C.G.S.X.
0.025e+0301622540_atCF207161hypothetical protein LOC100262384-4e-1At1g61580RPL3B (R-PROTEIN L3 B)O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.075e-652At5g23570Arabidopsis thaliana832422SGS3 (SUPPRESSOR OF GENE SILENCING 3)Required for posttranscriptional gene silencing and natural virus resistance.SGS3 is a member of an 'unknown' protein family. Members of this family have predicted coiled coiled domains suggesting oligomerization and a potential zinc finger domain. Involved in the production of trans-acting siRNAs, through direct or indirect stabilization of cleavage fragments of the primary ta-siRNA transcript. Acts before RDR6 in this pathway.---O.I.C.G.S.X.
0.331e-22107GmaAffx.60237.1.S1_atGlycine maxBM567800--2e-4At5g23570SGS3 (SUPPRESSOR OF GENE SILENCING 3)O.I.C.G.S.X.
0.039e-340Contig5840_atHordeum vulgareContig5840--2e-2At5g23570SGS3 (SUPPRESSOR OF GENE SILENCING 3)O.I.C.G.S.X.
0.132e-1067Os12g0197500Oryza sativaAK064217.1-XS zinc finger domain containing protein2e-2At5g23570SGS3 (SUPPRESSOR OF GENE SILENCING 3)O.I.C.G.S.X.
0.411e-62240PtpAffx.212091.1.S1_atPopulus trichocarpapmrna23720hypothetical protein-3e-5At5g23570SGS3 (SUPPRESSOR OF GENE SILENCING 3)O.I.C.G.S.X.
0.031e+034TaAffx.108007.1.S1_atTriticum aestivumCA692482--8e-1At1g28590lipase, putativeO.I.C.G.S.X.
0.085e-444Zm.5161.1.S1_atZea maysCD437341leafbladeless1-1e+0At1g54170CID3 (CTC-Interacting Domain 3)O.I.C.G.S.X.



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