Homology analysis

Gene ID 1613691_s_at
Gene name hypothetical protein LOC100254533
Functional description Similar to At2g05100: LHCB2.1 (Ev=5e-35)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.398e-562161610245_atCF209798hypothetical protein LOC100252066-1e-20At2g34430LHB1B1O.I.C.G.S.X.
0.344e-421711618116_s_atBQ798823hypothetical protein LOC100252004 /// hypothetical protein LOC100241745-2e-71At2g34420LHB1B2O.I.C.G.S.X.
0.343e-401651621351_s_atCB340283hypothetical protein LOC100250504-1e-39At1g29930CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1)O.I.C.G.S.X.
0.265e-231071612273_atBQ799966--3e-47At2g34420LHB1B2O.I.C.G.S.X.
0.292e-221051615822_atCF208321hypothetical protein LOC100260599-3e-92At5g54270LHCB3 (LIGHT-HARVESTING CHLOROPHYLL B-BINDING PROTEIN 3)O.I.C.G.S.X.
0.268e-221031621038_atCF372077hypothetical protein LOC100245214-6e-22At1g29930CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1)O.I.C.G.S.X.
0.237e-10631619629_atCB340944hypothetical protein LOC100251653-4e-56At5g54270LHCB3 (LIGHT-HARVESTING CHLOROPHYLL B-BINDING PROTEIN 3)O.I.C.G.S.X.
0.043e-3421614593_atCF511805hypothetical protein LOC100246457-2e-96At4g10340LHCB5 (LIGHT HARVESTING COMPLEX OF PHOTOSYSTEM II 5)O.I.C.G.S.X.
0.014e-2381622638_x_atX76892.1hypothetical protein LOC100254891 /// similar to Stilbene synthase 2 /// stilbene synthase 2-2e-4At5g13930TT4 (TRANSPARENT TESTA 4)O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.335e-35149At2g05100Arabidopsis thaliana815058LHCB2.1Lhcb2.1 protein encoding a subunit of the light harvesting complex II. Member of a gene family with high degree of sequence similarity. Initially LHCB2.3 was considered as a separate gene but appears to be an allele of LHCB2.1.---O.I.C.G.S.X.
0.508e-118424Gma.17554.1.S1_a_atGlycine maxCD391527--9e-80At2g05100LHCB2.1O.I.C.G.S.X.
0.512e-73276Contig189_s_atHordeum vulgareContig189--2e-34At2g34420LHB1B2O.I.C.G.S.X.
0.144e-25117Os03g0592500Oryza sativaAF061577.1-Photosystem II type II chlorophyll a/b bindingprotein (Fragment)3e-15At3g27690LHCB2.3O.I.C.G.S.X.
0.640702PtpAffx.6229.2.S1_atPopulus trichocarpaBP934327light-harvesting complex II protein Lhcb2-4e-48At2g05070LHCB2.2O.I.C.G.S.X.
0.262e-47190Ta.3795.1.S1_x_atTriticum aestivumU73218.1chlorophyll a/b-binding protein WCAB precursor-1e-26At2g34420LHB1B2O.I.C.G.S.X.
0.259e-38157Zm.13239.1.A1_atZea maysBG320233hypothetical LOC542287-4e-12At3g27690LHCB2.3O.I.C.G.S.X.



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