CoP: Co-expressed Biological Processes

Homology analysis

Gene ID 1608869_s_at

Gene name glyceraldehyde-3-phosphate dehydrogenase

Functional description Similar to At3g04120: GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1) (Ev=4e-41)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.27	2e-59	228	1615814_at	CB920915	hypothetical protein LOC100264789	-	0	At3g04120	GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)	O.I.	C.G.	S.X.
0.02	5e-7	54	1622715_s_at	CA809281	hypothetical protein LOC100246378	-	3e-68	At1g12900	GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2)	O.I.	C.G.	S.X.
0.03	5e-7	54	1617428_at	CB344473	hypothetical protein LOC100259814	-	7e-57	At1g42970	GAPB (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT)	O.I.	C.G.	S.X.
0.05	3e-2	38	1618095_at	CF210792	-	-	1e-82	At1g16300	GAPCP-2	O.I.	C.G.	S.X.
0.03	5e-1	34	1612355_at	CD010675	-	-	2e-15	At3g05090	transducin family protein / WD-40 repeat family protein	O.I.	C.G.	S.X.
0.02	5e-1	34	1609503_at	CF404599	hypothetical protein LOC100267009	-	3e-1	At5g11970	unknown protein	O.I.	C.G.	S.X.
0.02	2e+0	32	1617347_at	CB982365	hypothetical protein LOC100257949	-	7e-18	At3g05810	unknown protein	O.I.	C.G.	S.X.
0.02	2e+0	32	1617438_at	CF405183	-	-	9e-1	At4g21500	unknown protein	O.I.	C.G.	S.X.
0.02	2e+0	32	1614677_at	CF405759	-	-	6e-2	At3g25640	unknown protein	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.35	4e-41	169	At3g04120	Arabidopsis thaliana	819567	GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)	encodes cytosolic GADPH (C subunit) involved in the glycolytic pathway but also interacts with H2O2 potentially placing it in a signalling cascade induced by ROS.	-	-	-	O.I.	C.G.	S.X.
0.31	9e-37	155	Gma.17053.3.S1_at	Glycine max	CA783832	Cultivar JS385 glyceraldehyde 3-phosphate dehydrogenase	-	3e-45	At1g13440	GAPC2 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2)	O.I.	C.G.	S.X.
0.23	4e-15	81	HZ48K22r_s_at	Hordeum vulgare	HZ48K22r	glyceraldehyde-3-phosphate dehydrogenase	-	3e-13	At3g04120	GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)	O.I.	C.G.	S.X.
0.25	8e-41	169	Os02g0601300	Oryza sativa	AK099086.1	-	-	1e-166	At3g04120	GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)	O.I.	C.G.	S.X.
0.34	4e-45	182	PtpAffx.18295.2.A1_s_at	Populus trichocarpa	CV253912	hypothetical protein	-	2e-61	At1g13440	GAPC2 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2)	O.I.	C.G.	S.X.
0.19	1e-25	117	Ta.24991.1.S1_x_at	Triticum aestivum	CK214927	cytosolic glyceraldehyde-3-phosphate dehydrogenase GAPDH	-	4e-120	At3g04120	GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)	O.I.	C.G.	S.X.
0.11	1e-23	109	Zm.2601.1.S1_at	Zea mays	U45856.1	cytosolic glyceroldehyde-3-phosphate dehydrogenase GAPC3 /// glyceraldehyde-3-phosphate dehydrogenase	-	3e-139	At3g04120	GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)	O.I.	C.G.	S.X.

Back to the CoP portal site

Back to the KAGIANA project homepage