CoP: Co-expressed Biological Processes

Homology analysis

Gene ID 1607758_at

Gene name hypothetical protein LOC100267502

Functional description Similar to At1g75950: SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1) (Ev=3e-20)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.24	1e-41	169	1614112_at	BQ797230	hypothetical protein LOC100252349	-	3e-11	At5g42190	ASK2 (ARABIDOPSIS SKP1-LIKE 2)	O.I.	C.G.	S.X.
0.03	1e-1	36	1618092_at	CF203576.1	-	-	4e+0	At2g05380	GRP3S (GLYCINE-RICH PROTEIN 3 SHORT ISOFORM)	O.I.	C.G.	S.X.
0.03	5e-1	34	1617334_s_at	CF607954	-	-	1e-9	At5g65660	hydroxyproline-rich glycoprotein family protein	O.I.	C.G.	S.X.
0.02	5e-1	34	1607634_at	CF204724.1	-	-	2e-9	At5g65660	hydroxyproline-rich glycoprotein family protein	O.I.	C.G.	S.X.
0.02	5e-1	34	1607013_a_at	CA814207	hypothetical protein LOC100241044	-	1e-1	At4g14720	PPD2	O.I.	C.G.	S.X.
0.02	2e+0	32	1622641_at	CB008231	hypothetical protein LOC100255988	-	3e-2	At3g49300	proline-rich family protein	O.I.	C.G.	S.X.
0.02	2e+0	32	1620787_s_at	BM438036	hypothetical protein LOC100263709	-	6e-40	At5g35680	eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative	O.I.	C.G.	S.X.
0.01	2e+0	32	1618857_at	CB341740	hypothetical protein LOC100260191	-	3e-9	At5g03345	-	O.I.	C.G.	S.X.
0.02	2e+0	32	1618661_s_at	CF518549	hypothetical protein LOC100254504	-	1e-1	At3g23240	ERF1 (ETHYLENE RESPONSE FACTOR 1)	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.28	3e-20	99	At1g75950	Arabidopsis thaliana	843928	SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1)	SKP1 is core component of the SCF family of E3 ubiquitin ligases and serves to tether the rest of the complex to an F-box protein, which provides specificity in binding to ubiquitin ligase substrate proteins. Predominately expressed from leptotene to pachytene. Negatively regulates recombination. Interacts with P0, a silencing suppressor protein encoded by poleroviruses by means of a conserved minimal F-box motif.	-	-	-	O.I.	C.G.	S.X.
0.28	2e-56	220	Gma.5575.2.S1_at	Glycine max	CD403903	-	-	7e-30	At1g75950	SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1)	O.I.	C.G.	S.X.
0.25	5e-33	141	EBes01_SQ004_N07_at	Hordeum vulgare	EBes01_SQ004_N07	-	-	3e-1	At1g20140	ASK4 (ARABIDOPSIS SKP1-LIKE 4)	O.I.	C.G.	S.X.
0.26	1e-30	135	Os02g0101600	Oryza sativa	CB967135	-	SKP1 component family protein	2e-17	At5g42190	ASK2 (ARABIDOPSIS SKP1-LIKE 2)	O.I.	C.G.	S.X.
0.22	2e-37	157	PtpAffx.32590.1.S1_at	Populus trichocarpa	CV281093	hypothetical protein	-	1e-29	At5g42190	ASK2 (ARABIDOPSIS SKP1-LIKE 2)	O.I.	C.G.	S.X.
0.25	1e-29	131	Ta.23791.2.S1_x_at	Triticum aestivum	BJ214966	-	-	3e-7	At5g42190	ASK2 (ARABIDOPSIS SKP1-LIKE 2)	O.I.	C.G.	S.X.
0.21	5e-39	161	Zm.14147.1.A1_at	Zea mays	CD432997	hypothetical protein LOC100273349	-	6e-13	At1g75950	SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1)	O.I.	C.G.	S.X.

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