Co-expression analysis

Gene ID rbags23g22_at
Gene name
Homology with ArabidopsisSimilar to At5g16880: VHS domain-containing protein / GAT domain-containing protein (HF=5e+0)
Module size 6 genes
NF 0.10
%ile 12.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7388.70.88rbags23g22_atrbags23g22--5e+0At5g16880VHS domain-containing protein / GAT domain-containing proteinO.I.H.G.S.X.
0.4458.90.89Contig24327_atContig24327--2e+0At2g32470F-box family protein-relatedO.I.H.G.S.X.
0.3138.60.91Contig21303_atContig21303--2e+0At2g14890AGP9 (ARABINOGALACTAN PROTEIN 9)O.I.H.G.S.X.
0.086.50.90Contig1644_atContig1644--7e-13At4g03280PETC (PHOTOSYNTHETIC ELECTRON TRANSFER C)O.I.H.G.S.X.
0.086.50.90HVSMEg0017M01r2_atHVSMEg0017M01r2--5e+0At5g53120SPDS3 (SPERMIDINE SYNTHASE 3)O.I.H.G.S.X.
0.032.60.90Contig6328_atContig6328--9e-21At3g52560UEV1D-4 (UBIQUITIN E2 VARIANT 1D-4)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
24.299.8GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
21.999.8GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
19.899.7GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
6.298.0GSM16082238% SWC rep3GSE6990Barley drought stressLink to GEO
5.497.5GSM16081938% SWC rep1GSE6990Barley drought stressLink to GEO
5.297.4GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.696.8GSM160744drought control rep2GSE6990Barley drought stressLink to GEO
4.696.8GSM261032Dicktoo control-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO
4.396.4GSM261069Albina f-17 Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.296.3GSM261068Albina f-17 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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