Co-expression analysis

Gene ID	rbags1e22_s_at
Gene name
Homology with Arabidopsis	Similar to At3g56360: unknown protein (HF=3e-1)
Module size	6 genes
NF	0.70
%ile	91.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.97	rbags1e22_s_at	rbags1e22	-	-	3e-1	At3g56360	unknown protein	O.I.	H.G.	S.X.	Please select
0.71	87.1	0.97	Contig13332_at	Contig13332	-	-	2e+0	At1g68280	thioesterase-related	O.I.	H.G.	S.X.	Please select
0.60	77.3	0.97	Contig12594_at	Contig12594	-	-	3e+0	At5g11990	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.57	74.9	0.96	Contig24555_at	Contig24555	-	-	1e+0	At2g45070	SEC61 BETA	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.97	Contig9632_at	Contig9632	-	-	1e-1	At1g78370	ATGSTU20 (GLUTATHIONE S-TRANSFERASE TAU 20)	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.96	Contig13967_at	Contig13967	-	-	8e-6	At1g29800	phosphoinositide binding / zinc ion binding	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.9	97.1	GSM282038	Malting_kilned_Morex_rep1	GSE11200	Expression data from malting barley seeds
3.8	95.7	GSM282033	Malting_day4_Harrington_rep4	GSE11200	Expression data from malting barley seeds
3.0	93.8	GSM372945	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.9	93.4	GSM261069	Albina f-17 Control rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
2.7	92.7	GSM372989	genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.7	92.7	GSM282040	Malting_kilned_Morex_rep2	GSE11200	Expression data from malting barley seeds
2.6	92.3	GSM372984	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.6	92.3	GSM161220	cold treatment rep2	GSE6993	Barley low temperature stress
2.6	92.3	GSM282031	Malting_day1_Harrington_rep1	GSE11200	Expression data from malting barley seeds
2.5	91.9	GSM372985	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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