Co-expression analysis

Gene ID	rbags16k21_s_at
Gene name
Homology with Arabidopsis	Similar to At3g51520: diacylglycerol acyltransferase family (HF=1e+1)
Module size	6 genes
NF	0.40
%ile	55.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	90.8	0.96	rbags16k21_s_at	rbags16k21	-	-	1e+1	At3g51520	diacylglycerol acyltransferase family	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.96	Contig1021_at	Contig1021	-	-	5e+0	At5g46650	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.97	Contig4540_at	Contig4540	-	-	3e-2	At5g17460	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	42.6	0.96	Contig15344_at	Contig15344	-	-	4e-1	At1g56290	CwfJ-like family protein	O.I.	H.G.	S.X.	Please select
0.27	32.1	0.96	Contig15363_at	Contig15363	-	-	2e+0	At3g44980	unknown protein	O.I.	H.G.	S.X.	Please select
0.15	14.1	0.97	Contig4137_at	Contig4137	-	-	2e+0	At1g70895	CLE17 (CLAVATA3/ESR-RELATED 17)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.8	97.0	GSM213441	Barley seeds control in Hoagland solution for 12hr	GSE8618	P. aeruginosa virulent factor to barley
3.7	95.5	GSM213436	Barley seeds with P. aeruginosa PAO1 for 12hr	GSE8618	P. aeruginosa virulent factor to barley
3.4	94.8	GSM372953	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.3	94.6	GSM213443	Barley seeds with P. aeruginosa PA5021 mutant for 12hr	GSE8618	P. aeruginosa virulent factor to barley
3.3	94.6	GSM161220	cold treatment rep2	GSE6993	Barley low temperature stress
3.0	93.8	GSM238429	Embryo 16DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
3.0	93.8	GSM146362	Golden Promise Root Salt, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
2.9	93.4	GSM160744	drought control rep2	GSE6990	Barley drought stress
2.9	93.4	GSM146359	Golden Promise Root Control, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
2.8	93.1	GSM238434	Embryo 24 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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