Co-expression analysis

Gene ID	rbaal31p03_s_at
Gene name
Homology with Arabidopsis	Similar to At2g47170: ARF1A1C (HF=2e-22)
Module size	7 genes
NF	0.46
%ile	63.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	74.9	0.94	rbaal31p03_s_at	rbaal31p03	-	-	2e-22	At2g47170	ARF1A1C	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.95	HY10O14u_x_at	HY10O14u	-	-	6e-2	At2g47270	transcription factor/ transcription regulator	O.I.	H.G.	S.X.	Please select
0.46	61.0	0.96	rbah61h03_x_at	rbah61h03	-	-	5e-61	At4g05050	UBQ11 (UBIQUITIN 11)	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.98	Contig3603_at	Contig3603	-	-	2e-15	At3g25400	-	O.I.	H.G.	S.X.	Please select
0.33	42.6	0.97	Contig17523_at	Contig17523	-	-	7e-2	At4g08230	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.33	42.6	0.97	Contig4591_at	Contig4591	-	-	4e-2	At4g22890	PGR5-LIKE A	O.I.	H.G.	S.X.	Please select
0.32	40.3	0.95	Contig18852_at	Contig18852	-	-	1e+0	At1g31630	AGL86 (AGAMOUS-LIKE 86)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.3	98.1	GSM282031	Malting_day1_Harrington_rep1	GSE11200	Expression data from malting barley seeds
4.7	96.9	GSM146368	Maythorpe Root Salt, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.5	96.7	GSM238412	Endosperm 4DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
3.9	95.8	GSM372984	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.6	95.3	GSM146359	Golden Promise Root Control, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.5	95.1	GSM146377	Maythorpe shoot Control, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.4	94.8	GSM146376	Maythorpe shoot Control, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.3	94.6	GSM382237	Root_Control3	GSE15295	Mercury toxicity in barley roots
3.2	94.3	GSM146362	Golden Promise Root Salt, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.1	94.1	GSM372967	genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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