Co-expression analysis

Gene ID rbaal31o06_s_at
Gene name
Homology with ArabidopsisSimilar to At5g02500: HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) (HF=4e-5)
Module size 9 genes
NF 0.37
%ile 49.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5066.90.95rbaal31o06_s_atrbaal31o06--4e-5At5g02500HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)O.I.H.G.S.X.
0.4356.40.96Contig6767_s_atContig6767--2e-11At1g13640phosphatidylinositol 3- and 4-kinase family proteinO.I.H.G.S.X.
0.4053.10.97Contig8333_atContig8333--4e-2At3g56510TBP-binding protein, putativeO.I.H.G.S.X.
0.3647.10.95Contig4512_s_atContig4512--2e-2At2g22080unknown proteinO.I.H.G.S.X.
0.2528.90.96Contig8242_atContig8242--1e+0At5g11620SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-relatedO.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.595.1GSM238417Endosperm 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.993.4GSM238414Endosperm 8DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.792.7GSM282034Malting_steeped_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
2.390.9GSM16081938% SWC rep1GSE6990Barley drought stressLink to GEO
2.390.9GSM161220cold treatment rep2GSE6993Barley low temperature stressLink to GEO
2.390.9GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO
2.290.3GSM282037Malting_day1_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
2.189.7GSM398262HS41-1_0d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
2.189.7GSM261027ABA-Late-rep1GSE10328ABA experimentLink to GEO
2.089.0GSM261066Xantha s-46 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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