Co-expression analysis

Gene ID	rbaal31o06_s_at
Gene name
Homology with Arabidopsis	Similar to At5g02500: HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) (HF=4e-5)
Module size	9 genes
NF	0.37
%ile	49.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	66.9	0.95	rbaal31o06_s_at	rbaal31o06	-	-	4e-5	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	O.I.	H.G.	S.X.	Please select
0.46	61.0	0.96	HW03O14u_s_at	HW03O14u	-	-	3e+0	At5g63450	CYP94B1	O.I.	H.G.	S.X.	Please select
0.43	56.4	0.96	Contig6767_s_at	Contig6767	-	-	2e-11	At1g13640	phosphatidylinositol 3- and 4-kinase family protein	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.97	Contig8333_at	Contig8333	-	-	4e-2	At3g56510	TBP-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.36	47.1	0.95	Contig4512_s_at	Contig4512	-	-	2e-2	At2g22080	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	47.1	0.96	Contig8241_at	Contig8241	-	-	1e+0	At4g19390	-	O.I.	H.G.	S.X.	Please select
0.26	30.4	0.96	Contig3772_at	Contig3772	-	-	1e-1	At3g16240	DELTA-TIP	O.I.	H.G.	S.X.	Please select
0.25	28.9	0.96	Contig8242_at	Contig8242	-	-	1e+0	At5g11620	SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-related	O.I.	H.G.	S.X.	Please select
0.22	24.2	0.96	Contig6471_at	Contig6471	-	-	7e+0	At5g41570	WRKY24	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.5	95.1	GSM238417	Endosperm 16DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
2.9	93.4	GSM238414	Endosperm 8DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
2.7	92.7	GSM282034	Malting_steeped_Morex_rep1	GSE11200	Expression data from malting barley seeds
2.3	90.9	GSM160819	38% SWC rep1	GSE6990	Barley drought stress
2.3	90.9	GSM161220	cold treatment rep2	GSE6993	Barley low temperature stress
2.3	90.9	GSM261022	ABA-Control-rep2	GSE10328	ABA experiment
2.2	90.3	GSM282037	Malting_day1_Morex_rep2	GSE11200	Expression data from malting barley seeds
2.1	89.7	GSM398262	HS41-1_0d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
2.1	89.7	GSM261027	ABA-Late-rep1	GSE10328	ABA experiment
2.0	89.0	GSM261066	Xantha s-46 Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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