Co-expression analysis

Gene ID rbaal22m07_at
Gene name
Homology with ArabidopsisSimilar to At1g06440: ubiquitin thiolesterase (HF=2e-1)
Module size 8 genes
NF 0.45
%ile 62.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8092.50.97rbaal22m07_atrbaal22m07--2e-1At1g06440ubiquitin thiolesteraseO.I.H.G.S.X.
0.6077.30.96Contig13042_atContig13042--3e-1At1g60350anac024 (Arabidopsis NAC domain containing protein 24)O.I.H.G.S.X.
0.5066.90.97Contig16432_atContig16432--1e-2At3g12250TGA6 (TGACG MOTIF-BINDING FACTOR 6)O.I.H.G.S.X.
0.4053.10.97Contig2475_atContig2475--7e-2At4g11870unknown proteinO.I.H.G.S.X.
0.3849.50.97Contig9752_atContig9752--3e+0At2g11651unknown proteinO.I.H.G.S.X.
0.3647.10.96Contig11259_atContig11259--8e-4At5g17230phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferaseO.I.H.G.S.X.
0.3545.10.97Contig624_atContig624--3e-3At2g31390pfkB-type carbohydrate kinase family proteinO.I.H.G.S.X.
0.2835.50.97Contig725_s_atContig725--1e-15At1g21750ATPDIL1-1 (PDI-LIKE 1-1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.995.8GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.995.8GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.595.1GSM261075Albina e-16 Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.595.1GSM261074Albina e-16 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.494.8GSM161221cold treatment rep3GSE6993Barley low temperature stressLink to GEO
3.494.8GSM161200cold treatment rep1GSE6993Barley low temperature stressLink to GEO
3.394.6GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.194.1GSM282037Malting_day1_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
3.093.8GSM161220cold treatment rep2GSE6993Barley low temperature stressLink to GEO
2.893.1GSM261077Albina e-16 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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