Co-expression analysis

Gene ID rbaal13b22_at
Gene name
Homology with ArabidopsisSimilar to At4g05200: protein kinase family protein (HF=2e-5)
Module size 11 genes
NF 0.46
%ile 64.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5066.90.86rbaal13b22_atrbaal13b22--2e-5At4g05200protein kinase family proteinO.I.H.G.S.X.
0.7086.00.90Contig78_s_atContig78--4e-5At1g15690AVP1O.I.H.G.S.X.
0.7086.00.90Contig20846_atContig20846--3e-6At4g36860zinc ion bindingO.I.H.G.S.X.
0.6784.70.92Contig18444_atContig18444--2e+0At1g08650PPCK1 (PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE)O.I.H.G.S.X.
0.6077.30.91Contig18440_atContig18440--2e+0At3g56590hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.4356.40.91Contig11836_atContig11836--6e-10At1g22650beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeO.I.H.G.S.X.
0.3950.50.91HY09F04u_atHY09F04u--7e-1At2g21790RNR1 (RIBONUCLEOTIDE REDUCTASE 1)O.I.H.G.S.X.
0.3342.60.90Contig2490_atContig2490--1e-6At1g62660beta-fructosidase (BFRUCT3) / beta-fructofuranosidase / invertase, vacuolarO.I.H.G.S.X.
0.3240.30.92Contig6587_s_atContig6587--1e-4At3g52470harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinO.I.H.G.S.X.
0.2835.50.90Contig16389_atContig16389--4e-9At3g20440alpha-amylase/ catalytic/ cation bindingO.I.H.G.S.X.
0.2835.50.90Contig14353_atContig14353--9e-3At1g49950DNA-binding protein, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.096.0GSM71156Morex stress and unstress replicate 3GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
3.995.8GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.995.8GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.695.3GSM16082238% SWC rep3GSE6990Barley drought stressLink to GEO
3.494.8GSM372963genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.294.3GSM71153Barke stress and unstress replicate 4GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
2.993.4GSM440974Stressed awn_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
2.692.3GSM372964genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.692.3GSM440972Stressed awn_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
2.591.9GSM16081938% SWC rep1GSE6990Barley drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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