Co-expression analysis

Gene ID baak32n13_at
Gene name
Homology with ArabidopsisSimilar to At1g29930: CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1) (HF=8e-23)
Module size 6 genes
NF 0.05
%ile 6.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7790.80.65baak32n13_atbaak32n13--8e-23At1g29930CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1)O.I.H.G.S.X.
0.4053.10.73Contig5672_atContig5672--1e-2At4g13850GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2)O.I.H.G.S.X.
0.3647.10.81Contig1519_s_atContig1519--3e-2At4g19100unknown proteinO.I.H.G.S.X.
0.2935.50.84Contig10144_s_atContig10144--1e-13At1g52510hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.086.50.81Contig4782_s_atContig4782--4e-1At5g11950protein homodimerizationO.I.H.G.S.X.
0.011.10.72Contig9172_atContig9172--4e-4At3g62020GLP10 (GERMIN-LIKE PROTEIN 10)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.995.8GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.294.3GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.093.8GSM372956genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.893.1GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO
2.792.7GSM372940genotype: Mla6 - pathogen isolates: 5874 - time: 0 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.792.7GSM372992genotype: 11542 - pathogen isolates: K1 - time: 0 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.792.7GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.692.3GSM261028ABA-Late-rep2GSE10328ABA experimentLink to GEO
2.692.3GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.692.3GSM372939genotype: Mla6 - pathogen isolates: 5874 - time: 0 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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