Co-expression analysis

Gene ID ZmAffx.988.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g50562: unknown protein (HF=3e+0)
Module size 12 genes
NF 0.41
%ile 47.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7087.00.98ZmAffx.988.1.S1_atAI834703--3e+0At5g50562unknown proteinO.I.H.G.S.X.
0.5267.30.98Zm.11586.1.A1_atBM379136--6e+0Atmg00280-O.I.H.G.S.X.
0.5065.70.99Zm.3964.1.A1_a_atAF205603.1ferric-chelate reductase (NADH)2-1e-17At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)O.I.H.G.S.X.
0.4455.70.99Zm.17625.1.A1_atCF631845--4e-23At1g10200WLIM1O.I.H.G.S.X.
0.4048.50.98ZmAffx.1219.1.S1_s_at40794996-166--2e-1At1g13760unknown proteinO.I.H.G.S.X.
0.4048.50.99Zm.17716.1.A1_a_atCK370089--4e+0At4g05010F-box family proteinO.I.H.G.S.X.
0.4048.50.99Zm.12454.1.A1_atCF629114hypothetical protein LOC100273736-6e-3At1g10640polygalacturonaseO.I.H.G.S.X.
0.3844.20.99ZmAffx.533.1.S1_atAI711769--8e-1At5g11790Ndr family proteinO.I.H.G.S.X.
0.3538.90.99Zm.9948.1.A1_atCB3507883-N-debenzoyl-2-deoxytaxol N-benzoyltransferase-2e+0At1g54575unknown proteinO.I.H.G.S.X.
0.2828.10.98Zm.6147.2.S1_atCD942228--4e-24At3g51800ATG2O.I.H.G.S.X.
0.2318.60.99Zm.18012.1.A1_atCK827313--2e-3At5g48950thioesterase family proteinO.I.H.G.S.X.
0.2115.50.99Zm.15.1.A1_atAY271262.1NADP malic enzyme3-3e-16At1g79750ATNADP-ME4 (NADP-malic enzyme 4)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
18.299.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.299.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.899.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM375788Deep-sowing 10d treatment Control, biological rep1GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing conditionLink to GEO
6.197.4GSM375795Deep-sowing 10d treatment Control, biological rep2GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing conditionLink to GEO
6.097.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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