Co-expression analysis

Gene ID	ZmAffx.982.4.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g17615: CBL1 (CALCINEURIN B-LIKE PROTEIN 1) (HF=3e+0)
Module size	6 genes
NF	0.55
%ile	73.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	1.00	ZmAffx.982.4.S1_at	AW787457	-	-	3e+0	At4g17615	CBL1 (CALCINEURIN B-LIKE PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.73	89.9	1.00	Zm.3610.1.A1_at	AW065778	hypothetical protein LOC100276901	-	2e+0	At4g04360	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	1.00	Zm.361.1.A1_at	AB060130.1	response regulator 8	-	5e-3	At3g16857	ARR1 (ARABIDOPSIS RESPONSE REGULATOR 1)	O.I.	H.G.	S.X.	Please select
0.44	55.7	1.00	ZmAffx.871.1.A1_at	AI770769	-	-	8e-1	At1g69760	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	55.7	1.00	Zm.14302.1.A1_at	BG841920	proteasome subunit alpha type 3	-	9e-28	At2g27020	PAG1	O.I.	H.G.	S.X.	Please select
0.26	22.7	1.00	Zm.3908.1.S1_at	CF036708	hypothetical protein LOC100193155	-	2e-3	At5g15750	RNA-binding S4 domain-containing protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
12.6	98.7	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.3	98.5	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.2	98.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.7	98.3	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.6	98.3	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.5	98.3	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.3	98.2	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.8	98.1	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.6	98.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.4	94.9	GSM320468	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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