| Gene ID | ZmAffx.954.1.S1_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At1g26480: GRF12 (GENERAL REGULATORY FACTOR 12) (HF=3e+0) |
| Module size | 7 genes |
| NF | 0.65 |
| %ile | 87.1 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.60 | 77.8 | 0.99 | ZmAffx.954.1.S1_at | AI833471 | - | - | 3e+0 | At1g26480 | GRF12 (GENERAL REGULATORY FACTOR 12) | O.I. | H.G. | S.X. | |
| 0.92 | 99.2 | 0.99 | Zm.12526.1.A1_x_at | AI734393 | - | - | 3e+0 | At1g58150 | unknown protein | O.I. | H.G. | S.X. | |
| 0.71 | 88.2 | 0.99 | Zm.15.1.A1_at | AY271262.1 | NADP malic enzyme3 | - | 3e-16 | At1g79750 | ATNADP-ME4 (NADP-malic enzyme 4) | O.I. | H.G. | S.X. | |
| 0.63 | 81.1 | 0.99 | Zm.9952.1.A1_at | BM349898 | - | - | 6e+0 | At5g46115 | unknown protein | O.I. | H.G. | S.X. | |
| 0.53 | 69.1 | 0.99 | Zm.1690.1.A1_at | CK347441 | density-regulated protein | - | 4e-17 | At5g11900 | eukaryotic translation initiation factor SUI1 family protein | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.99 | Zm.17712.1.S1_at | CK370052 | hypothetical protein LOC100275406 | - | 8e-20 | At5g19855 | unknown protein | O.I. | H.G. | S.X. | |
| 0.43 | 52.8 | 0.99 | ZmAffx.917.1.S1_at | AI782944 | - | - | 1e+1 | At5g26810 | pectinesterase family protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 18.9 | 99.2 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 16.4 | 99.0 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 15.9 | 99.0 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 14.8 | 98.9 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 13.8 | 98.8 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 12.8 | 98.7 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.0 | 98.5 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.0 | 98.5 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.1 | 98.2 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.0 | 96.7 | GSM290555 | CCR mutant M1 with array type maize from Affymetrix | GSE11531 | Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize) | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 98.6 | GmaAffx.78127.1.S1_at | At1g26480 | - | - | 4e-6 | At3g16560 | protein phosphatase 2C-related / PP2C-related | O.I. | H.G. | S.X. | |
| 0.36 | 50.8 | Gma.6922.1.S1_at | At1g26480 | - | - | 3e-7 | At2g03120 | ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE) | O.I. | H.G. | S.X. | |
| 0.29 | 39.0 | Gma.4016.1.S1_at | At1g26480 | - | - | 6e-9 | At4g30480 | tetratricopeptide repeat (TPR)-containing protein | O.I. | H.G. | S.X. | |
| 0.29 | 39.0 | GmaAffx.5401.1.S1_s_at | At1g26480 | - | - | 2e-1 | At4g30930 | NFD1 (NUCLEAR FUSION DEFECTIVE 1) | O.I. | H.G. | S.X. | |
| 0.27 | 35.7 | Gma.11015.2.S1_at | At1g26480 | - | - | 9e-34 | At3g53500 | zinc knuckle (CCHC-type) family protein | O.I. | H.G. | S.X. | |
| 0.11 | 14.2 | Gma.17906.1.S1_s_at | At1g26480 | - | - | 2e-11 | At2g20280 | zinc finger (CCCH-type) family protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Hordeum_vulgare |
| Oryza_sativa |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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