Co-expression analysis

Gene ID ZmAffx.930.1.A1_at
Gene name
Homology with ArabidopsisSimilar to Atmg01210: - (HF=9e+0)
Module size 21 genes
NF 0.39
%ile 43.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.00.99ZmAffx.930.1.A1_atAI795480--9e+0Atmg01210-O.I.H.G.S.X.
0.5775.10.99ZmAffx.108.1.S1_atAI665554Hypothetical protein LOC100191707-8e-1At5g39640unknown proteinO.I.H.G.S.X.
0.5369.10.99Zm.4814.3.A1_atCD440511elongation factor 1-beta-2e-10At1g30230elongation factor 1-beta / EF-1-betaO.I.H.G.S.X.
0.5065.70.99ZmAffx.1103.1.A1_atAW191100--1e+1At5g43700ATAUX2-11 (AUXIN INDUCIBLE 2-11)O.I.H.G.S.X.
0.5065.71.00ZmAffx.1183.1.A1_atAW927833--1e+0At1g19920APS2O.I.H.G.S.X.
0.4759.90.99Zm.382.2.A1_atAY109511.1Leucine-rich repeat transmembrane protein kinase 2-1e-22At3g14350SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)O.I.H.G.S.X.
0.4759.90.99ZmAffx.543.1.S1_atAI712085--3e+0At4g03510RMA1O.I.H.G.S.X.
0.4455.71.00Zm.3169.5.S1_x_atAI739763minichromosome maintenance protein-1e-1At5g44635minichromosome maintenance family protein / MCM family proteinO.I.H.G.S.X.
0.4048.51.00Zm.10487.1.S1_atCF009695desiccation-associated protein-1e-1At1g12665-O.I.H.G.S.X.
0.3945.61.00ZmAffx.1092.1.S1_s_atAW066155--1e-107Atcg00490-O.I.H.G.S.X.
0.3742.30.99Zm.12300.1.A1_atCF626520ruBisCO large subunit-binding protein subunit alpha-1e-37At2g28000CPN60A (CHAPERONIN-60ALPHA)O.I.H.G.S.X.
0.3641.30.99Zm.6809.2.A1_a_atAW308676hypothetical protein LOC100273388-5e+0At1g62220unknown proteinO.I.H.G.S.X.
0.3538.90.99Zm.6085.2.A1_a_atAI759119hypothetical protein LOC100280198-1e+1At5g53820unknown proteinO.I.H.G.S.X.
0.3336.00.99ZmAffx.853.1.A1_atAI770653--2e-1At3g06130heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.3336.00.99Zm.10501.1.S1_atBQ485592hypothetical protein LOC100194407-7e+0At5g66005Expressed proteinO.I.H.G.S.X.
0.3233.40.99ZmAffx.190.1.A1_atAI881316--5e-2At3g56910PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)O.I.H.G.S.X.
0.3233.40.99Zm.7016.1.A1_a_atAY103859.1hypothetical protein LOC100275203 /// hypothetical protein LOC100276238-3e-1At5g44610MAP18 (Microtubule-associated Protein 18)O.I.H.G.S.X.
0.2828.10.99Zm.5087.1.A1_atAI600775--3e-1At5g37478-O.I.H.G.S.X.
0.2724.61.00Zm.1368.1.A1_atCA399867calcineurin B-like protein 3-3e-40At5g55990CBL2 (CALCINEURIN B-LIKE 2)O.I.H.G.S.X.
0.2622.70.99Zm.17928.1.A1_atBQ538697hypothetical protein LOC100217238-4e+0At5g09660PMDH2 (peroxisomal NAD-malate dehydrogenase 2)O.I.H.G.S.X.
0.2318.60.99Zm.1619.1.A1_atBE012216--1e+1Atcg00760-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.098.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.498.7GSM320470protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.498.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.498.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.398.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.198.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.898.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320468protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320469protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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