Co-expression analysis

Gene ID ZmAffx.927.1.S1_at
Gene name hypothetical protein LOC100279113
Homology with ArabidopsisSimilar to At3g05935: unknown protein (HF=3e+0)
Module size 10 genes
NF 0.52
%ile 68.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6986.50.97ZmAffx.927.1.S1_atAI795433hypothetical protein LOC100279113-3e+0At3g05935unknown proteinO.I.H.G.S.X.
0.6785.80.98Zm.2226.1.A1_atBE129637structural molecule-5e-7At5g54110ATMAMI (ARABIDOPSIS THALIANA MEMBRANE-ASSOCIATED MANNITOL-INDUCED)O.I.H.G.S.X.
0.5976.10.98Zm.15800.3.S1_atCK370046--4e-13At4g13780methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putativeO.I.H.G.S.X.
0.5369.10.98ZmAffx.1154.1.A1_atAW424688--3e+0At3g52480unknown proteinO.I.H.G.S.X.
0.5369.10.99Zm.13490.1.A1_atCD997217--4e-8At3g54670TTN8 (TITAN8)O.I.H.G.S.X.
0.4455.70.99ZmAffx.501.1.A1_atAI691747--8e-1At5g62100ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2)O.I.H.G.S.X.
0.4455.70.98ZmAffx.399.1.S1_atAI676827--6e+0At1g26921unknown proteinO.I.H.G.S.X.
0.4352.80.98Zm.11594.1.S1_atBM379195hypothetical protein LOC100277981-2e+0At5g50175unknown proteinO.I.H.G.S.X.
0.4352.80.98Zm.876.1.S1_atBG316815--4e+0At5g45740unknown proteinO.I.H.G.S.X.
0.3538.90.99ZmAffx.1182.1.S1_atAW927764saposin-like type B, region 1 family protein-8e-4At3g51730saposin B domain-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.799.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.998.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.598.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.198.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.098.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.898.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.798.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.898.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.094.0GSM205429B73xMo17 19 DAP endosperm tissue biological replicate 2GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAPLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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