Co-expression analysis

Gene ID	ZmAffx.917.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g26810: pectinesterase family protein (HF=1e+1)
Module size	7 genes
NF	0.59
%ile	78.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.48	61.3	0.99	ZmAffx.917.1.S1_at	AI782944	-	-	1e+1	At5g26810	pectinesterase family protein	O.I.	H.G.	S.X.	Please select
0.83	95.6	0.99	Zm.9952.1.A1_at	BM349898	-	-	6e+0	At5g46115	unknown protein	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.99	ZmAffx.908.1.S1_at	AI770943	hypothetical protein LOC100279225	-	8e-1	At5g41720	-	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.99	Zm.1690.1.A1_at	CK347441	density-regulated protein	-	4e-17	At5g11900	eukaryotic translation initiation factor SUI1 family protein	O.I.	H.G.	S.X.	Please select
0.53	69.1	0.99	Zm.10674.1.A1_at	BM380580	hypothetical protein LOC100194243	-	1e+0	At4g25720	QC (GLUTAMINYL CYCLASE)	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.99	Zm.17712.1.S1_at	CK370052	hypothetical protein LOC100275406	-	8e-20	At5g19855	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.99	ZmAffx.848.1.A1_at	AI770631	-	-	8e-1	At1g22720	wall-associated kinase, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
23.5	99.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.7	99.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.0	99.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.6	99.3	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.0	99.2	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.2	99.0	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.2	98.0	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.6	97.9	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.1	97.7	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.5	92.6	GSM320460	protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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