Co-expression analysis

Gene ID	ZmAffx.894.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g62300: 40S ribosomal protein S20 (RPS20C) (HF=8e-1)
Module size	6 genes
NF	0.35
%ile	36.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	89.9	0.99	ZmAffx.894.1.A1_at	AI770873	-	-	8e-1	At5g62300	40S ribosomal protein S20 (RPS20C)	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.99	ZmAffx.812.1.A1_at	AI770420	-	-	8e-4	At1g49730	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.99	Zm.18127.1.S1_at	CN845217	membrin 11	-	1e-8	At5g50440	MEMB12 (MEMBRIN 12)	O.I.	H.G.	S.X.	Please select
0.35	38.9	0.99	ZmAffx.742.1.S1_at	AI740139	-	-	3e+0	At1g10650	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.32	33.4	0.99	ZmAffx.1194.1.A1_at	BE025369	-	-	4e+0	At5g59990	-	O.I.	H.G.	S.X.	Please select
0.20	14.2	0.99	Zm.3180.1.A1_at	AW179477	-	-	7e-1	At1g32700	zinc-binding family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
12.6	98.7	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.2	98.6	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.5	98.6	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.2	98.5	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.0	98.5	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.3	98.4	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.5	98.3	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.1	98.2	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.1	98.2	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.7	93.2	GSM162267	Mutant 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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