Co-expression analysis

Gene ID ZmAffx.879.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At3g57720: protein kinase, putative (HF=2e-1)
Module size 38 genes
NF 0.35
%ile 36.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.99100.00.98ZmAffx.879.1.A1_atAI770799--2e-1At3g57720protein kinase, putativeO.I.H.G.S.X.
0.5775.10.99Zm.2265.1.S1_x_atAW330882--3e+0At3g49720unknown proteinO.I.H.G.S.X.
0.5469.80.99Zm.3602.1.A1_atBG873973--6e-1At1g18490unknown proteinO.I.H.G.S.X.
0.5369.10.98Zm.10329.1.S1_atBQ163458hypothetical protein LOC100279503-1e+0At5g20500glutaredoxin, putativeO.I.H.G.S.X.
0.5369.10.99ZmAffx.871.1.A1_atAI770769--8e-1At1g69760unknown proteinO.I.H.G.S.X.
0.5369.10.99ZmAffx.1173.1.S1_atAW787668--3e+0At3g47800aldose 1-epimerase family proteinO.I.H.G.S.X.
0.4961.90.99Zm.13635.1.A1_atAY107316.1growth regulator like protein-4e+0At3g52070unknown proteinO.I.H.G.S.X.
0.4961.90.99Zm.9956.1.A1_atBM076038--1e+1At4g30993unknown proteinO.I.H.G.S.X.
0.4759.90.99Zm.2868.1.A1_atCO521622--1e+0At3g28560-O.I.H.G.S.X.
0.4658.40.99Zm.4308.1.A1_atAY112093.1--1e-1At1g08390nucleic acid bindingO.I.H.G.S.X.
0.4556.40.99Zm.6234.2.S1_atAI881460--8e-7At2g30110ATUBA1O.I.H.G.S.X.
0.4556.40.99Zm.1628.2.A1_atAW787801--3e-1At1g08465YAB2 (YABBY2)O.I.H.G.S.X.
0.4455.70.99ZmAffx.82.1.A1_atAI665291hypothetical protein LOC100273025-5e-2At4g11910-O.I.H.G.S.X.
0.4455.70.99Zm.3826.1.S1_atBQ528704hypothetical protein LOC100216630-6e-4At4g02690glutamate bindingO.I.H.G.S.X.
0.4149.70.99Zm.8978.1.S1_atCK985765--3e-18At5g67030ABA1 (ABA DEFICIENT 1)O.I.H.G.S.X.
0.4048.50.99Zm.5337.1.A1_atBM079465--1e+0At5g11440CID5O.I.H.G.S.X.
0.3844.20.99Zm.8679.1.A1_atBM348355--4e-5At2g19450TAG1 (TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1)O.I.H.G.S.X.
0.3844.20.99Zm.5990.1.S1_atAY111300.1hypothetical protein LOC100279510-2e-6At5g49980AFB5 (Auxin F-Box protein 5)O.I.H.G.S.X.
0.3844.20.99Zm.17260.1.A1_atCK145375hypothetical protein LOC100277879-1e+0At2g38730peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putativeO.I.H.G.S.X.
0.3742.30.99Zm.9965.1.A1_atCB350986--2e+1At5g49640unknown proteinO.I.H.G.S.X.
0.3641.30.99Zm.1513.1.S1_atL46400.1MADS box protein-9e-13At5g60910AGL8 (agamous-like 8)O.I.H.G.S.X.
0.3437.20.99Zm.6739.2.S1_a_atBU582158ABI3-interacting protein 2-5e-5At5g48385-O.I.H.G.S.X.
0.3233.40.99ZmAffx.52.1.S1_atAI665021--1e-1At3g0711060S ribosomal protein L13A (RPL13aA)O.I.H.G.S.X.
0.3029.80.99Zm.17842.1.S1_atCK787020calcium-dependent protein kinase, isoform AK1-3e-11At5g12480CPK7 (calmodulin-domain protein kinase 7)O.I.H.G.S.X.
0.3029.80.99Zm.1530.1.S1_atBM080103nucleus protein-6e+0At5g48860unknown proteinO.I.H.G.S.X.
0.3029.80.99Zm.9409.1.A1_atAY108164.1--3e-1At1g79850RPS17 (RIBOSOMAL PROTEIN S17)O.I.H.G.S.X.
0.3029.80.99Zm.13841.1.S1_atAY104076.1--2e-42At3g62270anion exchange family proteinO.I.H.G.S.X.
0.2724.60.99Zm.14598.1.A1_atCF636680--2e-2At3g63460WD-40 repeat family proteinO.I.H.G.S.X.
0.2419.80.99ZmAffx.1136.1.A1_atAW331220--3e+0At4g15460glycine-rich proteinO.I.H.G.S.X.
0.2216.90.99ZmAffx.109.1.S1_atAI665560--8e-1At4g09270unknown proteinO.I.H.G.S.X.
0.2014.20.99ZmAffx.982.4.S1_atAW787457--3e+0At4g17615CBL1 (CALCINEURIN B-LIKE PROTEIN 1)O.I.H.G.S.X.
0.1811.60.99Zm.4848.2.S1_a_atAI770366SIR2-like histone deacetylase-2e-1At5g55760SRT1 (sirtuin 1)O.I.H.G.S.X.
0.1811.60.99Zm.3034.1.A1_atAW134469ZCN15 protein-2e-2At2g27550ATC (ARABIDOPSIS THALIANA CENTRORADIALIS)O.I.H.G.S.X.
0.1811.60.99Zm.3054.1.S1_atBU493611electron transfer flavoprotein beta-subunit-9e-6At5g43430ETFBETAO.I.H.G.S.X.
0.1710.60.99ZmAffx.75.1.A1_atAI665209--1e+1At5g54530unknown proteinO.I.H.G.S.X.
0.1710.60.99Zm.10553.1.A1_atCD441187--4e+0At1g22710SUC2 (SUCROSE-PROTON SYMPORTER 2)O.I.H.G.S.X.
0.169.40.99Zm.2939.2.A1_a_atU39958.1NADP-dependent malic enzyme-1e-40At5g11670ATNADP-ME2 (NADP-malic enzyme 2)O.I.H.G.S.X.
0.169.40.99Zm.9991.1.S1_atBQ619114hypothetical protein LOC100191513-7e-17At5g093002-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.098.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.898.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.398.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.298.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.898.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.898.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.692.9GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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