Co-expression analysis

Gene ID ZmAffx.877.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g16240: acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative (HF=8e-1)
Module size 16 genes
NF 0.26
%ile 21.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8595.90.99ZmAffx.877.1.S1_atAI770795--8e-1At5g16240acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeO.I.H.G.S.X.
0.5267.30.99Zm.14759.1.S1_atCB280800hypothetical protein LOC100191677-4e-2At5g46640DNA-binding family proteinO.I.H.G.S.X.
0.4861.30.99Zm.18974.1.A1_atBQ539399hypothetical protein LOC100272472-3e-1At1g17147-O.I.H.G.S.X.
0.4759.90.99Zm.13551.1.A1_atAY108205.1--2e+0At2g33870ArRABA1h (Arabidopsis Rab GTPase homolog A1h)O.I.H.G.S.X.
0.4455.70.99Zm.5884.1.A1_atBM340350hypothetical protein LOC100192097-8e-2At2g35880-O.I.H.G.S.X.
0.4251.30.99Zm.13345.2.A1_x_atCD435730hypothetical protein LOC100279020-2e+0At5g62360invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.3437.20.99Zm.7054.1.S1_atBM331766actin-depolymerizing factor 6-6e-4At5g59890ADF4 (ACTIN DEPOLYMERIZING FACTOR 4)O.I.H.G.S.X.
0.2928.10.99Zm.12300.1.A1_atCF626520ruBisCO large subunit-binding protein subunit alpha-1e-37At2g28000CPN60A (CHAPERONIN-60ALPHA)O.I.H.G.S.X.
0.2724.60.99Zm.6119.1.A1_atAY105312.1--4e-3At2g28380DRB2 (DSRNA-BINDING PROTEIN 2)O.I.H.G.S.X.
0.2115.50.99ZmAffx.480.1.A1_atAI677621transmembrane 9 superfamily protein member 4-8e-1At1g18871unknown proteinO.I.H.G.S.X.
0.1912.80.99ZmAffx.208.1.S1_atAI670216--6e-1At5g15460MUB2 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2)O.I.H.G.S.X.
0.1811.60.99Zm.6809.2.A1_a_atAW308676hypothetical protein LOC100273388-5e+0At1g62220unknown proteinO.I.H.G.S.X.
0.1811.60.99ZmAffx.893.1.A1_atAI770864--3e+0At2g17500auxin efflux carrier family proteinO.I.H.G.S.X.
0.1710.60.99Zm.15242.1.A1_atBM340075--1e+1At3g16712unknown proteinO.I.H.G.S.X.
0.1710.60.99Zm.2040.1.S1_atBM338990hypothetical protein LOC100194284-3e-3At3g15355UBC25 (UBIQUITIN-CONJUGATING ENZYME 25)O.I.H.G.S.X.
0.125.90.99Zm.17494.1.A1_atCK145115hypothetical protein LOC100193709-3e-20At1g68010HPRO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
23.099.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
19.199.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
18.599.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.899.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.999.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.999.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.599.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.199.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.098.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.797.2GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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