Co-expression analysis

Gene ID ZmAffx.858.1.S1_at
Gene name hypothetical protein LOC100279877
Homology with ArabidopsisSimilar to At1g11850: unknown protein (HF=8e-1)
Module size 20 genes
NF 0.48
%ile 59.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7892.50.99ZmAffx.858.1.S1_atAI770694hypothetical protein LOC100279877-8e-1At1g11850unknown proteinO.I.H.G.S.X.
0.5875.10.99Zm.12739.1.S1_atBG835843SR repressor protein-2e-1At3g55460SCL30O.I.H.G.S.X.
0.5674.40.99Zm.2684.1.A1_atAW066853--3e+0At1g49510emb1273 (embryo defective 1273)O.I.H.G.S.X.
0.5674.40.99ZmAffx.536.1.S1_atAI711796--1e+1At5g65430GRF8 (GENERAL REGULATORY FACTOR 8)O.I.H.G.S.X.
0.5674.41.00Zm.13664.1.S1_atBG836397--6e-17At3g15610transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.5369.11.00Zm.2463.2.S1_atAW191411hypothetical protein LOC100193981-3e+0At2g14890AGP9 (ARABINOGALACTAN PROTEIN 9)O.I.H.G.S.X.
0.5369.11.00Zm.5775.1.A1_atAI649573--1e+1At3g06600unknown proteinO.I.H.G.S.X.
0.5166.41.00Zm.9517.1.A1_atBM269495--2e+1Atmg00630-O.I.H.G.S.X.
0.5065.70.99Zm.1837.1.S1_a_atCF014756cp protein-1e-2At5g01610unknown proteinO.I.H.G.S.X.
0.5065.71.00Zm.12405.1.A1_atBM381554alpha/beta hydrolase fold-2e+0At1g64340unknown proteinO.I.H.G.S.X.
0.4658.40.99Zm.1039.3.S1_atAI677375Hypothetical protein LOC100194359-3e+0At4g18580unknown proteinO.I.H.G.S.X.
0.4556.40.99ZmAffx.1207.1.A1_atBE186221--1e+1At5g16960NADP-dependent oxidoreductase, putativeO.I.H.G.S.X.
0.4455.71.00Zm.8632.1.A1_atBM268513--5e+0At3g55672-O.I.H.G.S.X.
0.4455.70.99ZmAffx.719.1.A1_atAI739898--2e+0At3g55646unknown proteinO.I.H.G.S.X.
0.4352.81.00Zm.17267.1.S1_atCK368940hypothetical protein LOC100275082-5e-1At1g80920J8O.I.H.G.S.X.
0.4149.70.99Zm.1619.1.A1_atBE012216--1e+1Atcg00760-O.I.H.G.S.X.
0.3945.61.00Zm.5495.1.S1_atAY103870.1--1e-30At2g44100ATGDI1 (ARABIDOPSIS THALIANA GUANOSINE NUCLEOTIDE DIPHOSPHATE DISSOCIATION INHIBITOR 1)O.I.H.G.S.X.
0.3641.30.99Zm.16895.1.A1_atBM075234--2e+0At5g15100PIN8 (PIN-FORMED 8)O.I.H.G.S.X.
0.3641.30.99ZmAffx.1169.1.A1_atAW681259--3e+0At4g36540BEE2 (BR Enhanced Expression 2)O.I.H.G.S.X.
0.2828.11.00ZmAffx.900.1.A1_atAI770893--1e+1At5g19480unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
19.299.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.999.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.999.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.199.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.298.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.298.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.198.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.198.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.797.2GSM206324Upper pulvinus 2 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage