Co-expression analysis

Gene ID ZmAffx.852.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At3g12690: AGC1.5 (AGC KINASE 1.5) (HF=1e-11)
Module size 6 genes
NF 0.20
%ile 14.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.60.99ZmAffx.852.1.A1_atAI770652--1e-11At3g12690AGC1.5 (AGC KINASE 1.5)O.I.H.G.S.X.
0.4658.40.99ZmAffx.208.1.S1_atAI670216--6e-1At5g15460MUB2 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2)O.I.H.G.S.X.
0.3029.80.99Zm.13740.1.A1_atAW330707--2e-16At2g29140APUM3 (Arabidopsis Pumilio 3)O.I.H.G.S.X.
0.2318.60.99ZmAffx.898.1.A1_atAI770889--8e-1At3g15280unknown proteinO.I.H.G.S.X.
0.147.70.99ZmAffx.406.9.A1_atAI670512--1e+1At5g16580BGLU2 (BETA GLUCOSIDASE 2)O.I.H.G.S.X.
0.083.40.99Zm.4166.1.A1_atBG841131hypothetical protein LOC100191831-1e+0At1g17145protein binding / zinc ion bindingO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.699.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.398.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.898.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.098.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.198.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.898.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.198.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.198.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.494.9GSM202304B73 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1620986_at, orthologous to the query gene, ZmAffx.852.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6787.91620986_atAt3g12690--2e-2At2g31957LCR75 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 75)O.I.H.G.S.X.
0.5072.71612848_x_atAt3g12690--2e-19At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)O.I.H.G.S.X.
0.4464.11619608_atAt3g12690--2e-19At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)O.I.H.G.S.X.
0.2937.71608175_atAt3g12690hypothetical protein LOC100265591-4e+0At1g78260RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.2937.71610245_atAt3g12690hypothetical protein LOC100252066-1e-20At2g34430LHB1B1O.I.H.G.S.X.
0.2734.01622344_atAt3g12690hypothetical protein LOC100241684-1e+0At2g03620magnesium transporter CorA-like family protein (MRS2-5)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum



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