Co-expression analysis

Gene ID ZmAffx.821.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At3g21840: ASK7 (ARABIDOPSIS SKP1-LIKE 7) (HF=3e+0)
Module size 17 genes
NF 0.37
%ile 40.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9499.50.97ZmAffx.821.1.A1_atAI770497--3e+0At3g21840ASK7 (ARABIDOPSIS SKP1-LIKE 7)O.I.H.G.S.X.
0.6582.10.97Zm.1482.2.A1_atCO531725hypothetical protein LOC100279242-7e+0At5g17280unknown proteinO.I.H.G.S.X.
0.5571.60.97Zm.4471.3.A1_x_atBQ619323pyruvate, orthophosphate dikinase1-6e+0At2g36895unknown proteinO.I.H.G.S.X.
0.4961.90.96Zm.2041.1.A1_atCO517600hypothetical protein LOC100191381-3e-3At4g24770RBP31 (31-KDA RNA BINDING PROTEIN)O.I.H.G.S.X.
0.4759.90.98Zm.9975.1.A1_atBM074697--7e-6At5g64200ATSC35O.I.H.G.S.X.
0.4048.50.97Zm.18816.1.A1_atCO527305indole-3-acetate beta-glucosyltransferase-1e+0At4g33730pathogenesis-related protein, putativeO.I.H.G.S.X.
0.3945.60.97Zm.3780.3.S1_atCF008471--2e+0At1g29720protein kinase family proteinO.I.H.G.S.X.
0.3538.90.97Zm.19250.1.S1_atBG841370--3e-12At4g24740AFC2 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 2)O.I.H.G.S.X.
0.3131.60.98Zm.6454.1.A1_atAY106137.1PP1/PP2A phosphatases pleiotropic regulator PRL1-9e-29At4g15900PRL1 (PLEIOTROPIC REGULATORY LOCUS 1)O.I.H.G.S.X.
0.3029.80.97Zm.628.1.A1_atAF244677.1glutathione S-transferase12-6e-1At3g21960-O.I.H.G.S.X.
0.3029.80.98Zm.13763.1.A1_atCF624710hypothetical protein LOC100279845-2e-4At4g386901-phosphatidylinositol phosphodiesterase-relatedO.I.H.G.S.X.
0.2724.60.97Zm.5280.1.S1_atCK368650--2e-8At1g76760ATY1 (ARABIDOPSIS THIOREDOXIN Y1)O.I.H.G.S.X.
0.2724.60.97Zm.1056.1.S1_atAW120162ribosomal protein S22 homolog-3e-17At5g6230040S ribosomal protein S20 (RPS20C)O.I.H.G.S.X.
0.2419.80.97Zm.3699.5.A1_atAY107222.1--3e-2At5g09995unknown proteinO.I.H.G.S.X.
0.2419.80.97Zm.2810.1.S1_atCK371548calcitonin peptide-receptor component protein-7e-1At1g18170immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinO.I.H.G.S.X.
0.2216.90.97Zm.2094.1.S1_atCD651096hypothetical protein LOC100192908-8e-19At2g36060ubiquitin-conjugating enzyme family proteinO.I.H.G.S.X.
0.1912.80.98Zm.2016.1.S1_atAW566149zinc finger, C3HC4 type family protein-2e+0At5g51195unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
18.199.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.198.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.598.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.298.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.697.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.094.0GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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