Co-expression analysis

Gene ID ZmAffx.812.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g49730: protein kinase family protein (HF=8e-4)
Module size 10 genes
NF 0.38
%ile 41.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7288.60.97ZmAffx.812.1.S1_atAI770420--8e-4At1g49730protein kinase family proteinO.I.H.G.S.X.
0.5065.70.97Zm.9326.1.A1_atBM332291hypothetical protein LOC100193353-5e+0At5g09600SDH3-1O.I.H.G.S.X.
0.4048.50.97ZmAffx.529.1.S1_atAI711694Hypothetical protein LOC100191956-8e-1At1g63230pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.3742.30.97Zm.6230.1.A1_atAI649825hypothetical protein LOC100279247-1e-15At2g25737unknown proteinO.I.H.G.S.X.
0.3641.30.97Zm.11077.1.A1_atBM336854--2e+1At4g03205coproporphyrinogen III oxidase, putative / coproporphyrinogenase, putative / coprogen oxidase, putativeO.I.H.G.S.X.
0.3233.40.97Zm.16976.1.S1_atCA404460--2e-10At1g68410protein phosphatase 2C-related / PP2C-relatedO.I.H.G.S.X.
0.3233.40.97Zm.6631.1.A1_atAY108443.1hypothetical protein LOC100191632-1e-2At5g11100SYTDO.I.H.G.S.X.
0.3029.80.97Zm.6630.2.S1_atCD447067hypothetical protein LOC100193888-3e-2At1g15750TPL (TOPLESS)O.I.H.G.S.X.
0.3029.80.97Zm.13530.1.A1_atAY108362.1--2e-6At1g30270CIPK23 (CBL-INTERACTING PROTEIN KINASE 23)O.I.H.G.S.X.
0.2724.60.97Zm.11824.1.A1_atAY313903.1yabby9 protein-4e-12At4g00180YAB3 (YABBY3)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
25.999.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
23.299.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
21.299.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
20.899.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.399.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.099.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.699.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.098.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.198.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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