Co-expression analysis

Gene ID ZmAffx.812.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g49730: protein kinase family protein (HF=8e-4)
Module size 8 genes
NF 0.38
%ile 40.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5775.10.99ZmAffx.812.1.A1_atAI770420--8e-4At1g49730protein kinase family proteinO.I.H.G.S.X.
0.6077.80.99ZmAffx.894.1.A1_atAI770873--8e-1At5g6230040S ribosomal protein S20 (RPS20C)O.I.H.G.S.X.
0.5065.70.99ZmAffx.477.1.A1_atAI677582--8e-1At5g51860MADS-box protein (AGL72)O.I.H.G.S.X.
0.4251.30.99ZmAffx.742.1.S1_atAI740139--3e+0At1g10650protein binding / zinc ion bindingO.I.H.G.S.X.
0.3538.90.99ZmAffx.559.1.A1_atAI714543--3e+0At5g48970mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.3336.00.99Zm.18127.1.S1_atCN845217membrin 11-1e-8At5g50440MEMB12 (MEMBRIN 12)O.I.H.G.S.X.
0.3233.40.99Zm.14437.2.S1_atAI600681RNA binding protein-3e+0At5g66010RNA binding / nucleic acid binding / nucleotide bindingO.I.H.G.S.X.
0.1912.80.99Zm.3180.1.A1_atAW179477--7e-1At1g32700zinc-binding family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.098.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.598.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.697.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.497.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.396.9GSM320458protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.196.8GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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