Co-expression analysis

Gene ID	ZmAffx.810.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At3g01880: unknown protein (HF=2e-1)
Module size	6 genes
NF	0.89
%ile	99.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	92.1	0.92	ZmAffx.810.1.A1_at	AI770396	-	-	2e-1	At3g01880	unknown protein	O.I.	H.G.	S.X.	Please select
0.91	99.0	0.97	Zm.204.1.A1_at	U22432.1	ras related protein1	-	2e-90	At4g17170	RABB1C (ARABIDOPSIS RAB GTPASE HOMOLOG B1C)	O.I.	H.G.	S.X.	Please select
0.83	95.6	0.95	Zm.13444.1.S1_at	CD441205	dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit	-	2e-2	At1g76400	ribophorin I family protein	O.I.	H.G.	S.X.	Please select
0.80	94.0	0.96	Zm.14465.1.S1_at	AY108241.1	hypothetical protein LOC100279274	-	5e-15	At3g24550	ATPERK1 (PROLINE EXTENSIN-LIKE RECEPTOR KINASE 1)	O.I.	H.G.	S.X.	Please select
0.80	94.0	0.97	Zm.4338.3.A1_at	AW000126	-	-	3e+0	At5g27170	unknown protein	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.94	Zm.3740.1.A1_at	BG840857	22.0 kDa class IV heat shock protein	-	1e-1	At4g24240	WRKY7	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
24.2	99.6	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.6	99.2	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.3	98.9	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.7	98.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.7	98.7	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.8	98.6	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.8	98.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.2	98.5	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.0	98.4	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.4	96.2	GSM253269	ZM_4.5d_Mock_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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