Co-expression analysis

Gene ID ZmAffx.799.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g75080: BZR1 (BRASSINAZOLE-RESISTANT 1) (HF=5e-2)
Module size 19 genes
NF 0.26
%ile 21.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7188.20.95ZmAffx.799.1.A1_atAI770347--5e-2At1g75080BZR1 (BRASSINAZOLE-RESISTANT 1)O.I.H.G.S.X.
0.4861.30.97ZmAffx.1106.1.S1_atAW216267--3e-3At1g60550ECHID (ENOYL-COA HYDRATASE/ISOMERASE D)O.I.H.G.S.X.
0.4658.40.97Zm.13931.1.A1_x_atZ35302.1--8e-1At1g09630ATRAB11C (ARABIDOPSIS RAB GTPASE 11C)O.I.H.G.S.X.
0.4455.70.96ZmAffx.831.1.A1_atAI770541Hypothetical protein LOC100191667-2e-1At1g21900emp24/gp25L/p24 family proteinO.I.H.G.S.X.
0.4251.30.97ZmAffx.482.1.S1_atAI691285--3e+0At5g57510unknown proteinO.I.H.G.S.X.
0.4048.50.97Zm.17669.1.A1_atAY104632.1--3e+0At1g79790haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.3336.00.97ZmAffx.897.1.S1_atAI770885--2e-1At2g12170unknown proteinO.I.H.G.S.X.
0.3233.40.97Zm.7023.2.A1_atAI734540--9e-1At2g27250CLV3 (CLAVATA3)O.I.H.G.S.X.
0.3233.40.97Zm.3283.2.A1_a_atBM335982hypothetical protein LOC100192072-2e+0At3g46110unknown proteinO.I.H.G.S.X.
0.3029.80.97Zm.1085.4.A1_atBM349000--7e-9At1g55670PSAG (PHOTOSYSTEM I SUBUNIT G)O.I.H.G.S.X.
0.2928.10.97Zm.15605.1.S1_atCA402349isopenicillin N epimerase-2e-2At3g62130epimerase-relatedO.I.H.G.S.X.
0.2928.10.97ZmAffx.871.1.S1_atAI770769hypothetical protein LOC100273239-8e-1At1g69760unknown proteinO.I.H.G.S.X.
0.2216.90.97Zm.19280.1.S1_atCO524637hypothetical protein LOC100276261-4e-6At5g39660CDF2 (CYCLING DOF FACTOR 2)O.I.H.G.S.X.
0.2014.20.97Zm.9900.1.A1_atBM351046--2e-2At5g28610-O.I.H.G.S.X.
0.1912.80.96Zm.605.2.A1_atAI668174Plasma membrane integral protein ZmPIP2-1-8e-4At3g61430PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A)O.I.H.G.S.X.
0.1710.60.97Zm.4471.5.A1_atBF729171protein kinase APK1B-2e-2At3g47510unknown proteinO.I.H.G.S.X.
0.169.40.97Zm.280.1.A1_atU58208.1Binding protein homolog1-0At5g42020BIP2O.I.H.G.S.X.
0.115.30.96Zm.9635.1.A1_atBM334297--2e+1At5g55940emb2731 (embryo defective 2731)O.I.H.G.S.X.
0.115.30.97Zm.4640.1.A1_atCF623843KH domain containing protein-3e+0At2g31085CLE6 (CLAVATA3/ESR-RELATED 6)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.998.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.698.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.298.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.298.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
1.888.9GSM202310B73 19 day after pollination embryo tissue, biological replicate 1GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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