Co-expression analysis

Gene ID	ZmAffx.789.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At4g05010: F-box family protein (HF=3e+0)
Module size	11 genes
NF	0.62
%ile	83.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	65.7	0.90	ZmAffx.789.1.A1_at	AI759114	-	-	3e+0	At4g05010	F-box family protein	O.I.	H.G.	S.X.	Please select
0.82	94.6	0.93	Zm.17685.1.A1_at	AW126592	-	-	6e-1	At1g55010	PDF1.5 (plant defensin 1.5)	O.I.	H.G.	S.X.	Please select
0.82	94.6	0.94	Zm.12134.2.S1_at	AY106643.1	hypothetical protein LOC100193898	-	1e+0	At4g08691	unknown protein	O.I.	H.G.	S.X.	Please select
0.80	94.0	0.94	Zm.17350.1.A1_at	CO524170	-	-	2e+1	Atcg00300	-	O.I.	H.G.	S.X.	Please select
0.80	94.0	0.95	Zm.509.1.S1_at	AF096871.1	calcium pump1	-	3e-11	At1g07810	ECA1 (ER-TYPE CA2+-ATPASE 1)	O.I.	H.G.	S.X.	Please select
0.76	91.1	0.94	Zm.16365.1.S1_at	CF625542	hypothetical protein LOC100278838	-	5e+0	At3g44440	unknown protein	O.I.	H.G.	S.X.	Please select
0.72	88.6	0.95	Zm.1737.2.S1_at	AW355997	-	-	8e-1	At1g15140	oxidoreductase NAD-binding domain-containing protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.95	Zm.16142.1.S1_at	CF243882	hypothetical protein LOC100194402	-	9e-1	At5g51210	OLEO3 (OLEOSIN3)	O.I.	H.G.	S.X.	Please select
0.63	81.1	0.93	ZmAffx.985.1.S1_at	AI834468	-	-	1e+1	At4g36900	RAP2.10 (related to AP2 10)	O.I.	H.G.	S.X.	Please select
0.40	48.5	0.94	ZmAffx.744.1.A1_s_at	AI745738	global transcription factor group E	-	1e-1	At1g48300	unknown protein	O.I.	H.G.	S.X.	Please select
0.34	37.2	0.94	Zm.1604.1.S1_at	BF728928	-	-	4e+0	At5g05650	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
15.9	99.0	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.6	98.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.9	98.7	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.6	98.7	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.0	98.6	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.0	98.5	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.4	98.4	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.2	98.2	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.5	98.1	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.8	97.6	GSM202304	B73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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